RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ARSGQ96EG1 525 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 PIWIL1Q96J94 861 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 ZSWIM3Q96MP5 696 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 QRFPRQ96P65 431 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 KLHL5Q96PQ7 755 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SECISBP2Q96T21 854 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 LZTS2Q9BRK4 669 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 H2AFJQ9BTM1 129 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 PTDSS2Q9BVG9 487 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 TBC1D10AQ9BXI6 508 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 PLEKHA4Q9H4M7 779 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 ANKZF1Q9H8Y5 726 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 GPN1Q9HCN4 374 aaPredicted RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM114A2Q9NRY5 505 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 KLC4Q9NSK0 619 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 PNPLA3Q9NST1 481 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 C19orf73Q9NVV2 129 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SIRT5Q9NXA8 310 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 UBAP1Q9NZ09 502 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 CHRNA9Q9UGM1 479 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 EXO1Q9UQ84 846 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC4A4Q9Y6R1 1079 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SPACA6W5XKT8 324 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 SCN4AP35499 1836 aa5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 DDX60Q8IY21 1712 aaKnown RBP5.14□□□□□ -1.59
VPS35P1-201ENST00000563400 A0A087WZY1 265 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GSAPA4D1B5 854 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF503-AS2A6NEH8 195 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 MANSC4A6NHS7 340 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 STMND1H3BQB6 276 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC16A3O15427 465 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SMAD6O43541 496 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PSPNO60542 156 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 FLOT1O75955 427 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 FGFR1OPO95684 399 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 HPXP02790 462 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 KRT6BP04259 564 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ERBB2P04626 1255 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ITGB1P05556 798 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 S100A9P06702 114 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CAPN2P17655 700 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EPHA3P29320 983 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TKTP29401 623 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GJC1P36383 396 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 WNT5AP41221 380 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EPS15P42566 896 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 KRT6CP48668 564 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 VCPP55072 806 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 NPEPPSP55786 919 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CLRN1P58418 232 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 C1QTNF8P60827 252 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SRP54P61011 504 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 HAND2P61296 217 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EIF4HQ15056 248 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PCGF3Q3KNV8 242 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 KRT71Q3SY84 523 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ATP13A5Q4VNC0 1218 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 LBHQ53QV2 105 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CFAP157Q5JU67 520 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PAQR3Q6TCH7 311 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 LARP4Q71RC2 724 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 BNIPLQ7Z465 357 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 XYLT1Q86Y38 959 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PM20D2Q8IYS1 436 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC24A4Q8NFF2 622 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ACTRT2Q8TDY3 377 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC9A6Q92581 669 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ESR2Q92731 530 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PEX13Q92968 403 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SPSB1Q96BD6 273 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EEF2KMTQ96G04 330 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 C16orf58Q96GQ5 468 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PSKH2Q96QS6 385 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ASCL2Q99929 193 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ELOVL1Q9BW60 279 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 NUF2Q9BZD4 464 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EGLN1Q9GZT9 426 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TDRD3Q9H7E2 651 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EVA1AQ9H8M9 152 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TNFRSF12AQ9NP84 129 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EXOC1Q9NV70 894 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM184CQ9NVA4 438 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 STEAP1Q9UHE8 339 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 DDX25Q9UHL0 483 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GAKO14976 1311 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ASTN2O75129 1339 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PHLPP2Q6ZVD8 1323 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 FER1L6Q2WGJ9 1857 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TRBV2A0A0J9YWF9 115 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ARHGAP42A6NI28 874 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 MED7O43513 233 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 HEXAP06865 529 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 RHOXF2BP0C7M4 288 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 EPB41P11171 864 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ANXA8P13928 327 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PFKFB1P16118 471 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 NR1D1P20393 614 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms