RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZSCAN5AQ9BUG6 496 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 SPATA16Q9BXB7 569 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 PITPNM3Q9BZ71 974 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 GANQ9H2C0 597 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 FANCEQ9HB96 536 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 PCDH9Q9HC56 1237 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 SLC22A11Q9NSA0 550 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 SLC24A2Q9UI40 661 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 RWDD2AQ9UIY3 292 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 FBXL4Q9UKA2 621 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 RPL26L1Q9UNX3 145 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CDYLQ9Y232 598 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CFAP20Q9Y6A4 193 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 FN1P02751 2386 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 ABCA4P78363 2273 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ANKRD66B4E2M5 251 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 E7EQ34 232 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 HCRTR1O43613 425 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 CDK14O94921 469 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 UNC5CO95185 931 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 MMP2P08253 660 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 HBQ1P09105 142 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 IGFBP2P18065 325 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 POLR2CP19387 275 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 AMPD1P23109 780 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 MIPP30301 263 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 DNAJA1P31689 397 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 MTIF2P46199 727 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 NSFP46459 744 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 PREPP48147 710 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 LMAN1P49257 510 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ZNF135P52742 658 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 IST1P53990 364 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 MFAP5Q13361 173 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 INAQ16352 499 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 CYP2A13Q16696 494 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.47□□□□□ -1.215e-6■■□□□ 11.7
HERPUD1-206ENST00000563343 VWA3BQ502W6 1294 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ALS2CLQ60I27 953 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 RHBDD2Q6NTF9 364 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ISLR2Q6UXK2 745 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 CDHR3Q6ZTQ4 885 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 PSTKQ8IV42 348 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 NACC2Q96BF6 587 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 VPS35Q96QK1 796 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 LMF1Q96S06 567 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 INSM2Q96T92 566 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 FOXC2Q99958 501 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 C17orf62Q9BQA9 187 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 POLR1EQ9GZS1 481 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 EPS8L2Q9H6S3 715 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 ABI3Q9P2A4 366 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 PCSK1NQ9UHG2 260 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 HOOK1Q9UJC3 728 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 TSR3Q9UJK0 312 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 SERTAD3Q9UJW9 196 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 PSMD13Q9UNM6 376 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 HS3ST3B1Q9Y662 390 aa7.47□□□□□ -1.21
HERPUD1-206ENST00000563343 AKAP6Q13023 2319 aa7.46□□□□□ -1.21
HERPUD1-206ENST00000563343 COL6A5A8TX70 2615 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 RCCD1A6NED2 376 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 KCNJ13O60928 360 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 CTSBP07858 339 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 ITGAXP20702 1163 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 CDH3P22223 829 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 MMP11P24347 488 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 IL1R2P27930 398 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 SOX5P35711 763 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 GCGRP47871 477 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 CTSCP53634 463 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 TMEM115Q12893 351 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 FOXD4Q12950 439 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 NFE2L1Q14494 772 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 DPYSL2Q16555 572 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 C3AR1Q16581 482 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 LONRF1Q17RB8 773 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 SWT1Q5T5J6 900 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 C1orf189Q5VU69 101 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 METRNLQ641Q3 311 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 KIRREL2Q6UWL6 708 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 MEX3BQ6ZN04 569 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 TMC3Q7Z5M5 1100 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 POLNQ7Z5Q5 900 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 PRIMA1Q86XR5 153 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 TRAPPC5Q8IUR0 188 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 ATPAF2Q8N5M1 289 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 OR1N1Q8NGS0 311 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 CCHCR1Q8TD31 782 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 ZFPM2Q8WW38 1151 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 NRGNQ92686 78 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 NRTNQ99748 197 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 NDC1Q9BTX1 674 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 LHPPQ9H008 270 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 KIR3DX1Q9H7L2 352 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 ZFYVE1Q9HBF4 777 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 FAM60AQ9NP50 221 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 IMP3Q9NV31 184 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms