RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ARGFXA6NJG6 315 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SLC9B1P1A6NJY1 282 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 GP1BBP13224 206 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 UQCRFS1P47985 274 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ZNF140P52738 457 aaPredicted RBP16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TMPRSS15P98073 1019 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PDE1BQ01064 536 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OTUD4Q01804 1114 aaKnown RBP16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 GSE1Q14687 1217 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ZNF789Q5FWF6 425 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ANKRD20A2Q5SQ80 823 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ANKRD20A1Q5TYW2 823 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ANKRD20A3Q5VUR7 823 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ATCAYQ86WG3 371 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 NXPE1Q8N323 547 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OR8K5Q8NH50 307 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 HM13Q8TCT9 377 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ADAMTS17Q8TE56 1095 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PSMG3-AS1Q96PY0 264 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FAM118BQ9BPY3 351 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MLXIPLQ9NP71 852 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CRLS1Q9UJA2 301 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PCDHA13Q9Y5I0 950 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 COLEC10Q9Y6Z7 277 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 NBASA2RRP1 2371 aa16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PRRC2CQ9Y520 2896 aaKnown RBP16.24■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 USP9XQ93008 2570 aaPredicted RBP16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCL22O00626 93 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PYGMP11217 842 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CDH3P22223 829 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 NDUFS1P28331 727 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RORAP35398 523 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PTGIRP43119 386 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 NADK2Q4G0N4 442 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ZNF658BQ4V348 819 aaPredicted RBP16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PLEKHS1Q5SXH7 462 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCDC181Q5TID7 509 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 DENND5AQ6IQ26 1287 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 DSELQ8IZU8 1212 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ACVR1CQ8NER5 493 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCDC110Q8TBZ0 833 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 DCUN1D1Q96GG9 259 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 LRFN5Q96NI6 719 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCM2Q9BSQ5 444 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SLC25A23Q9BV35 468 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ING2Q9H160 280 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OR52A5Q9H2C5 316 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TSPY26PQ9H489 355 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 C1GALT1Q9NS00 363 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 AAR2Q9Y312 384 aaKnown RBP16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 HEBP2Q9Y5Z4 205 aa16.23■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 C17orf113A0A1B0GUU1 675 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MACROD2A1Z1Q3 448 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCDC66A2RUB6 948 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MEN1O00255 615 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 BTN3A3O00478 584 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 KCNN4O15554 427 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PJA2O43164 708 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 LDB2O43679 373 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CRTAMO95727 393 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CAPN1P07384 714 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RALBP11234 206 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ATP1B2P14415 290 aaPredicted RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PTMSP20962 102 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CDKN1CP49918 316 aaPredicted RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CCL11P51671 97 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PGDP52209 483 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 GSDMDP57764 484 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 COPS2P61201 443 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PRKAA1Q13131 559 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 KRT33BQ14525 404 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SNX20Q7Z614 316 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OR1L3Q8NH93 324 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CPT1BQ92523 772 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ULK4Q96C45 1275 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FERD3LQ96RJ6 166 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 COPS8Q99627 209 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SRMSQ9H3Y6 488 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 COG4Q9H9E3 785 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ACSS2Q9NR19 701 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 EFR3BQ9Y2G0 817 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PCDHGA9Q9Y5G4 932 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PCDHA3Q9Y5H8 950 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PCSK5Q92824 1860 aa16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 USP9YO00507 2555 aaPredicted RBP16.22■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 IGLV3-16A0A075B6K0 115 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 GSAPA4D1B5 854 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 BLACEA4D250 179 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RCCD1A6NED2 376 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TTLL8A6PVC2 850 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TMEM150CB9EJG8 249 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MATN2O00339 956 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 BTN3A1O00481 513 aa16.21■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 KLK3P07288 261 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms