RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PHC2Q8IXK0 858 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 CATSPER1Q8NEC5 780 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 OR8K5Q8NH50 307 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 SHC3Q92529 594 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 FAM168AQ92567 244 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 DTD2Q96FN9 168 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 MAGED4Q96JG8 741 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 PLEKHG4BQ96PX9 1271 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TAAR6Q96RI8 345 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 CPXM1Q96SM3 734 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TBCBQ99426 244 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 NPY6RQ99463 290 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TREX2Q9BQ50 279 aaPredicted RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 SLC7A5P2Q9GIP4 190 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 KLC2Q9H0B6 622 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 LIME1Q9H400 295 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 SYNCQ9H7C4 482 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.17□□□□□ -1.58
HERC1-213ENST00000561359 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 EPHA6Q9UF33 1036 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 OR12D3Q9UGF7 316 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 EDARQ9UNE0 448 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 PTRH2Q9Y3E5 179 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 UBA6A0AVT1 1052 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 TRIM49BA6NDI0 452 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 TLCD2A6NGC4 264 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 KLRC4O43908 158 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ALOX12BO75342 701 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 KLF7O75840 302 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 SLCO2B1O94956 709 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 HEXIM1O94992 359 aaKnown RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 CRYABP02511 175 aaKnown RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 SPTBP11277 2137 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 XRCC1P18887 633 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 CYP2A7P20853 494 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 AGXTP21549 392 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 MST1P26927 711 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 VIPR1P32241 457 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 RORAP35398 523 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 FOLR3P41439 243 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SNX16P57768 344 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SLC6A3Q01959 620 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 DMPKQ09013 629 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 PWP1Q13610 501 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 STK38Q15208 465 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 MEA1Q16626 185 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 TMTC4Q5T4D3 741 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 IGFL2Q6UWQ7 119 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 LINC00696Q6ZRV3 163 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 NCCRP1Q6ZVX7 275 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 RRAGAQ7L523 313 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SLC26A9Q7LBE3 791 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SRLQ86TD4 932 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 FAM131BQ86XD5 332 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 KMT5CQ86Y97 462 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 MRPL41Q8IXM3 137 aaKnown RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 CEP57L1Q8IYX8 460 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 D2HGDHQ8N465 521 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 DNAAF3Q8N9W5 541 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ACRBPQ8NEB7 543 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ANKRD20A12PQ8NF67 263 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ZNF606Q8WXB4 792 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SDCCAG3Q96C92 435 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ECHDC3Q96DC8 303 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 PGAP3Q96FM1 320 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 COX4I2Q96KJ9 171 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 USP28Q96RU2 1077 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 MAP3K3Q99759 626 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 GTPBP4Q9BZE4 634 aaKnown RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 ACTR5Q9H9F9 607 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 FANCEQ9HB96 536 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 TMEM248Q9NWD8 314 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SOHLH2Q9NX45 425 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 CD84Q9UIB8 345 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ADAM30Q9UKF2 790 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 ADAM21Q9UKJ8 722 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 SIK3Q9Y2K2 1263 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 MEMO1Q9Y316 297 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 PCYT1BQ9Y5K3 369 aaPredicted RBP5.16□□□□□ -1.58
HERC1-213ENST00000561359 CAPN6Q9Y6Q1 641 aa5.16□□□□□ -1.58
HERC1-213ENST00000561359 TRAV17A0A0B4J275 112 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 DYTNA2CJ06 578 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 PDZK1P1A8MUH7 402 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 INAFM1C9JVW0 142 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 AGPSO00116 658 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 CETN3O15182 167 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 PROM1O43490 865 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 DNAJC6O75061 913 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 SOD1P00441 154 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 PF4P02776 101 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 ERBB2P04626 1255 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 ATP1A1P05023 1023 aaKnown RBP5.15□□□□□ -1.59
HERC1-213ENST00000561359 PYGMP11217 842 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 CYP2A6P11509 494 aaPredicted RBP5.15□□□□□ -1.59
HERC1-213ENST00000561359 IGFBP2P18065 325 aa5.15□□□□□ -1.59
HERC1-213ENST00000561359 UGT1A4P22310 534 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms