RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 LRRC45Q96CN5 670 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 AKIRIN1Q9H9L7 192 aaPredicted RBP15.8■□□□□ 0.12
SNX1-213ENST00000561026 POLHQ9Y253 713 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 HEBP2Q9Y5Z4 205 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 NBASA2RRP1 2371 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 IGLV3-16A0A075B6K0 115 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 CCL22O00626 93 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 MC4RP32245 332 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 KPNA2P52292 529 aaKnown RBP15.79■□□□□ 0.12
SNX1-213ENST00000561026 LACTB2Q53H82 288 aaPredicted RBP15.79■□□□□ 0.12
SNX1-213ENST00000561026 ARHGEF18Q6ZSZ5 1173 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 TMEM135Q86UB9 458 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 FAM71DQ8N9W8 422 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 TTC13Q8NBP0 860 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 ACRBPQ8NEB7 543 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 ACVR1CQ8NER5 493 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 OR4E2Q8NGC2 313 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 DNAJC1Q96KC8 554 aaKnown RBP15.79■□□□□ 0.12
SNX1-213ENST00000561026 GPR87Q9BY21 358 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 TWSG1Q9GZX9 223 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 ZDHHC3Q9NYG2 299 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 RELNP78509 3460 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 FLNCQ14315 2725 aa15.79■□□□□ 0.12
SNX1-213ENST00000561026 TRBV5-4A0A0C4DH59 114 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 CDC14CA4D256 554 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 H7C0S8 307 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 ARHGAP6O43182 974 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 METTL18O95568 372 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 PTMAP06454 111 aaKnown RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 TPH1P17752 444 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 POLR2CP19387 275 aaPredicted RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 ARCN1P48444 511 aaKnown RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 CDKN1CP49918 316 aaPredicted RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 ZNF658BQ4V348 819 aaPredicted RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 TMTC4Q5T4D3 741 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 FAM199XQ6PEV8 388 aaPredicted RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 PEX26Q7Z412 305 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 OR8K5Q8NH50 307 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 ZNF501Q96CX3 271 aaPredicted RBP15.78■□□□□ 0.12
SNX1-213ENST00000561026 PPM1MQ96MI6 270 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 ACTL8Q9H568 366 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 COG4Q9H9E3 785 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 AMFRQ9UKV5 643 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 BTRCQ9Y297 605 aa15.78■□□□□ 0.12
SNX1-213ENST00000561026 GOLGA6L9A6NEM1 432 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 MKRN2OSH3BPM6 223 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 MATN2O00339 956 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 CPNE3O75131 537 aaKnown RBP15.77■□□□□ 0.12
SNX1-213ENST00000561026 SCRG1O75711 98 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 ACRV1P26436 265 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 PTPN4P29074 926 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 PRKAA1Q13131 559 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 KLF1Q13351 362 aaPredicted RBP15.77■□□□□ 0.12
SNX1-213ENST00000561026 GPR19Q15760 415 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 ZRANB3Q5FWF4 1079 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 TCTN3Q6NUS6 607 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 FBXO38Q6PIJ6 1188 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 KIAA1328Q86T90 577 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 SERPINA9Q86WD7 417 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 TMEM126BQ8IUX1 230 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 LCN9Q8WX39 176 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 SEC14L1Q92503 715 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 FERD3LQ96RJ6 166 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 RUFY1Q96T51 708 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 OR52A5Q9H2C5 316 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 SRMSQ9H3Y6 488 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 LRRC40Q9H9A6 602 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 VPS37BQ9H9H4 285 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 C1GALT1Q9NS00 363 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 NLE1Q9NVX2 485 aaPredicted RBP15.77■□□□□ 0.12
SNX1-213ENST00000561026 SOHLH2Q9NX45 425 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 POMT2Q9UKY4 750 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 TP53TG5Q9Y2B4 290 aa15.77■□□□□ 0.12
SNX1-213ENST00000561026 SLC9B1P1A6NJY1 282 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 MIF4GDA9UHW6 222 aaKnown RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 K7EM74 188 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 IFRD1O00458 451 aaPredicted RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 PDHA2P29803 388 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 CD151P48509 253 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 PMS2P54278 862 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 RPS15P62841 145 aaKnown RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 P3H1Q32P28 736 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 ZNF517Q6ZMY9 492 aaPredicted RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 MICALCLQ6ZW33 695 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 TAS2R42Q7RTR8 314 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 APLFQ8IW19 511 aaPredicted RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 SYCE1Q8N0S2 351 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 CLDN19Q8N6F1 224 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 SLC38A9Q8NBW4 561 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 SLC35B2Q8TB61 432 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 CDKN2AIPNLQ96HQ2 116 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 BAG1Q99933 345 aaPredicted RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 TMEM121Q9BTD3 319 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 LATS2Q9NRM7 1088 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 TLK1Q9UKI8 766 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 PACSIN2Q9UNF0 486 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms