RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SIRPB2Q5JXA9 342 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TMEM173Q86WV6 379 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 NPAS4Q8IUM7 802 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CRIPAKQ8N1N5 446 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 HCAR2Q8TDS4 363 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 BCL7CQ8WUZ0 217 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TTC9Q92623 222 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 NODALQ96S42 347 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SOX17Q9H6I2 414 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 UXTQ9UBK9 157 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 EGFL7Q9UHF1 273 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 TOR1BO14657 336 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ANGPT2O15123 496 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 INPP4BO15327 924 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 KATNA1O75449 491 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 SUPT7LO94864 414 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 PRSS23O95084 383 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 NDST3O95803 873 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 DLGAP3O95886 979 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ATF6P18850 670 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 M6PRP20645 277 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 CLCN5P51795 746 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC12A2P55011 1212 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ARHGEF6Q15052 776 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF789Q5FWF6 425 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 PROSER1Q86XN7 944 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 CHDHQ8NE62 594 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF555Q8NEP9 628 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 GABPB2Q8TAK5 448 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 TSPEARQ8WU66 669 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 HEXDCQ8WVB3 486 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 NACC2Q96BF6 587 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC30A3Q99726 388 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 TTPALQ9BTX7 342 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 TTLL2Q9BWV7 592 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 POMKQ9H5K3 350 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 IGSF5Q9NSI5 407 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 CMTM6Q9NX76 183 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
RABGGTA-220ENST00000560998 A0A0J9YYE9 177 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 FXYD1O00168 92 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC7A4O43246 635 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 HOXA2O43364 376 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 TULP3O75386 442 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CCNKO75909 580 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 KCNK2O95069 426 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 GNRH1P01148 92 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ALPLP05186 524 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 KCNQ1P51787 676 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 IST1P53990 364 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 TPD52P55327 224 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 C1QTNF8P60827 252 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CDK10Q15131 360 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 C5orf22Q49AR2 442 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CCDC58Q4VC31 144 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF544Q6NX49 715 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 LARP4Q71RC2 724 aaKnown RBP eCLIP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 GALNT7Q86SF2 657 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 FUNDC1Q8IVP5 155 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 PSMA8Q8TAA3 256 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 HTRA1Q92743 480 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 GLMNQ92990 594 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SEMA3CQ99985 751 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 BTBD2Q9BX70 525 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ASPSCR1Q9BZE9 553 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 MFSD1Q9H3U5 465 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SLA2Q9H6Q3 261 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 PDFQ9HBH1 243 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 POLE4Q9NR33 117 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 GMPR2Q9P2T1 348 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 PCDHA9Q9Y5H5 950 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 MUSKO15146 869 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 XYLBO75191 536 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 GJB3O75712 270 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 MATN4O95460 622 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC6A2P23975 617 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ARSDP51689 593 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms