RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MID1O15344 667 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 LILRB5O75023 590 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 MATN4O95460 622 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 ATP6V1G2O95670 118 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GUCA1CO95843 209 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 CHEK2O96017 543 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 OTCP00480 354 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GSTM1P09488 218 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 PRR35P0CG20 571 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GPR1P46091 355 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 HSPA7P48741 367 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RAP1GDS1P52306 607 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 AP1S2P56377 157 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 TAS2R38P59533 333 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 ERVPABLB-1P60509 514 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GSTM4Q03013 218 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 AGERQ15109 404 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 AAK1Q2M2I8 961 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 C18orf21Q32NC0 220 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 WASHC2DQ5SRD0 308 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RAET1GQ6H3X3 334 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 OGFOD2Q6N063 350 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 BEND7Q8N7W2 519 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 LINC00615Q96LM1 132 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 TRIM54Q9BYV2 358 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 FBRSQ9HAH7 460 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 OPTCQ9UBM4 332 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 A8MUI8 341 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 K7ESM1 405 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 INPP4BO15327 924 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 SYNCRIPO60506 623 aaKnown RBP12.64□□□□□ -0.39
SNX1-211ENST00000560829 CRCPO75575 148 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 KRT34O76011 436 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 TM7SF2O76062 418 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 OR4F21O95013 312 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 C7P10643 843 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 CYP2A7P20853 494 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 NTSR1P30989 418 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 TIE1P35590 1138 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 PGM1P36871 562 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 WASP42768 502 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 MAPK9P45984 424 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 PIK3CGP48736 1102 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ACADVLP49748 655 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 HNMTP50135 292 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 TRAF3Q13114 568 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 CYLC2Q14093 348 aaPredicted RBP12.64□□□□□ -0.39
SNX1-211ENST00000560829 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 FAM219BQ5XKK7 198 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ZNF776Q68DI1 518 aaPredicted RBP12.64□□□□□ -0.39
SNX1-211ENST00000560829 LETMD1Q6P1Q0 360 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 TMEM220Q6QAJ8 160 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 RNF165Q6ZSG1 346 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ADGRG6Q86SQ4 1221 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 OR2T3Q8NH03 318 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ZNF514Q96K75 400 aaPredicted RBP12.64□□□□□ -0.39
SNX1-211ENST00000560829 MARK4Q96L34 752 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 IPPKQ9H8X2 491 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 TRIM39Q9HCM9 518 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 ARL15Q9NXU5 204 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 POLG2Q9UHN1 485 aa12.64□□□□□ -0.39
SNX1-211ENST00000560829 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
SNX1-211ENST00000560829 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TMEM202A6NGA9 273 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 VEGFDO43915 354 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 STK16O75716 305 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 ATP6AP2O75787 350 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HIST1H2AGP0C0S8 130 aaPredicted RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 LBPP18428 481 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HIST1H2ADP20671 130 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 SLC6A12P48065 614 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 RPS14P62263 151 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 MXRA7P84157 204 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 RALGPS2Q86X27 583 aaPredicted RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 DDIASQ8IXT1 998 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TMEM159Q96B96 161 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 COX14Q96I36 57 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HIST1H2AHQ96KK5 128 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 HIST1H2AJQ99878 128 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 H2AFJQ9BTM1 129 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 NTMT1Q9BV86 223 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 GPR34Q9UPC5 381 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TIMM22Q9Y584 194 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 C17orf113A0A1B0GUU1 675 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 MEI4A8MW99 385 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 CCNT2O60583 730 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 PSIP1O75475 530 aaKnown RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 ALDOCP09972 364 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms