RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	DCX	O43602	365 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	SYNCRIP	O60506	623 aa	Known RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	GPC4	O75487	556 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	TPPP	O94811	219 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	BMP10	O95393	424 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	GH2	P01242	217 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	MSH3	P20585	1137 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	CAPN3	P20807	821 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	GATA2	P23769	480 aa	Predicted RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	GARS	P41250	739 aa	Known RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	CD81	P60033	236 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	TUBB2A	Q13885	445 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	KIAA1644	Q3SXP7	199 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	TCTEX1D4	Q5JR98	221 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	SH2D5	Q6ZV89	423 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	RSRC2	Q7L4I2	434 aa	Known RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	MAATS1	Q7Z4T9	603 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	GALNT5	Q7Z7M9	940 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	ADGRF2	Q8IZF7	708 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	SRSF8	Q9BRL6	282 aa	Known RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	TRIM51	Q9BSJ1	452 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	TUBB2B	Q9BVA1	445 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	SEMA6A	Q9H2E6	1030 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	DNAJB4	Q9UDY4	337 aa		3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	3.08	□□□□□ -1.92
SLTM-223	ENST00000560532	AGRN	O00468	2067 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	SLC22A2	O15244	555 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	RB1	P06400	928 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	KRT19	P08727	400 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	IGHV4-38-2	P0DP08	117 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	HADHA	P40939	763 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	AIMP2	Q13155	320 aa	Known RBP	3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	IRF3	Q14653	427 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	NDUFAF5	Q5TEU4	345 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	CCDC30	Q5VVM6	783 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	ZDHHC20	Q5W0Z9	365 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	ARID3B	Q8IVW6	561 aa	Predicted RBP	3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	MCEMP1	Q8IX19	187 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	SCYL3	Q8IZE3	742 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	GRHL3	Q8TE85	626 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	LRRC59	Q96AG4	307 aa	Known RBP	3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	ZNF300	Q96RE9	604 aa	Predicted RBP	3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	HGH1	Q9BTY7	390 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	SLA2	Q9H6Q3	261 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	EXOG	Q9Y2C4	368 aa	Known RBP	3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	ITIH6	Q6UXX5	1313 aa		3.07	□□□□□ -1.92
SLTM-223	ENST00000560532	PLOD2	O00469	737 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	NDUFS4	O43181	175 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	ASTN2	O75129	1339 aa	Predicted RBP	3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	PRLR	P16471	622 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	PSMB10	P40306	273 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	BMX	P51813	675 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	THOP1	P52888	689 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	MFAP5	Q13361	173 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	ENPP2	Q13822	863 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	SNAI3	Q3KNW1	292 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	ASPRV1	Q53RT3	343 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	BHLHB9	Q6PI77	547 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	TEX11	Q8IYF3	940 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	TMTC2	Q8N394	836 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	TTC39C	Q8N584	583 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	BMPER	Q8N8U9	685 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	L3MBTL4	Q8NA19	623 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	OR2T12	Q8NG77	320 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	PRMT6	Q96LA8	375 aa	Predicted RBP	3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	DDO	Q99489	341 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	DENND2D	Q9H6A0	471 aa	Predicted RBP	3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	STK36	Q9NRP7	1315 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	SLC38A7	Q9NVC3	462 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	KCNJ14	Q9UNX9	436 aa		3.06	□□□□□ -1.92
SLTM-223	ENST00000560532	FLT1	P17948	1338 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	AGAP14	A8MT82	685 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	GPR137B	O60478	399 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	MITF	O75030	526 aa	Predicted RBP	3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	CLTB	P09497	229 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	LIF	P15018	202 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	ACADS	P16219	412 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	GNAZ	P19086	355 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	CBL	P22681	906 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	NMBR	P28336	390 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	EPHA2	P29317	976 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	SUOX	P51687	545 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	PPP2R2B	Q00005	443 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	DLG2	Q15700	870 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	MFSD6	Q6ZSS7	791 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	PLD3	Q8IV08	490 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	GPALPP1	Q8IXQ4	340 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	TBC1D16	Q8TBP0	767 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	SEMA4D	Q92854	862 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	SKA1	Q96BD8	255 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	MOAP1	Q96BY2	351 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	SLC47A1	Q96FL8	570 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	CCDC34	Q96HJ3	373 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	ZNF582	Q96NG8	517 aa	Predicted RBP	3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	NAP1L4	Q99733	375 aa	Known RBP	3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	CHCHD6	Q9BRQ6	235 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	PPIL3	Q9H2H8	161 aa	Known RBP	3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	DNAJC18	Q9H819	358 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	PELI2	Q9HAT8	420 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	EIF2B3	Q9NR50	452 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms