RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 EIF3BP55884 814 aaKnown RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 WNT3AP56704 352 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 TMEM115Q12893 351 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 TAZQ16635 292 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 LACTB2Q53H82 288 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 CACHD1Q5VU97 1274 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 PPP1R3BQ86XI6 285 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 UNC5BQ8IZJ1 945 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 TTC30BQ8N4P2 665 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 UBLCP1Q8WVY7 318 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 KLHL6Q8WZ60 621 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF514Q96K75 400 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 CD180Q99467 661 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 EPN3Q9H201 632 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 SEMA5BQ9P283 1151 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 KLHL8Q9P2G9 620 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 DNMT3AQ9Y6K1 912 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 GLYATL1P3A0A0U1RQE8 302 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 HACD1B0YJ81 288 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 AURKAO14965 403 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF28P17035 718 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 NELFEP18615 380 aaKnown RBP13.28□□□□□ -0.28
SMAD3-214ENST00000560402 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-214ENST00000560402 DLSTP36957 453 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 KCNJ1P48048 391 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 SEPHS1P49903 392 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 DHX9Q08211 1270 aaKnown RBP13.28□□□□□ -0.28
SMAD3-214ENST00000560402 IFFO1Q0D2I5 559 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 WASHC5Q12768 1159 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 MPP3Q13368 585 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 IRGCQ6NXR0 463 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 C16orf46Q6P387 395 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 GLT6D1Q7Z4J2 308 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 HOOK3Q86VS8 718 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 PTRH1Q86Y79 214 aaKnown RBP13.28□□□□□ -0.28
SMAD3-214ENST00000560402 KMT5CQ86Y97 462 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 P3H4Q92791 437 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 HAUS1Q96CS2 278 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 FCRL4Q96PJ5 515 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD3-214ENST00000560402 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 FSD1LQ9BXM9 530 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 BPIFA1Q9NP55 256 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 PDE7BQ9NP56 450 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 IL26Q9NPH9 171 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 IL17CQ9P0M4 197 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 LNPEPQ9UIQ6 1025 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 CROTQ9UKG9 612 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 TMPRSS11EQ9UL52 423 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 POLHQ9Y253 713 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 PKP3Q9Y446 797 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 PCDHGA6Q9Y5G7 932 aa13.28□□□□□ -0.28
SMAD3-214ENST00000560402 C21orf140B9A014 251 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 MKRN2OSH3BPM6 223 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 APOC4-APOC2K7ER74 178 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SMAPO00193 183 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-214ENST00000560402 CST8O60676 142 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 KIAA0754O94854 1291 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 KRT14P02533 472 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 APOC2P02655 101 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 FAM153BP0C7A2 387 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 PECAM1P16284 738 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-214ENST00000560402 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SH3BP2P78314 561 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 ACY1Q03154 408 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 LLGL1Q15334 1064 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SLC1A5Q15758 541 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 FAM153CQ494X1 144 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SIRPB2Q5JXA9 342 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 BPHLQ86WA6 291 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-214ENST00000560402 CARFQ8N187 725 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SIDT2Q8NBJ9 832 aaKnown RBP13.27□□□□□ -0.29
SMAD3-214ENST00000560402 GALNT6Q8NCL4 622 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 FERMT1Q9BQL6 677 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 ANAPC5Q9UJX4 755 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 TRHDEQ9UKU6 1024 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 RARRES3Q9UL19 164 aa13.27□□□□□ -0.29
SMAD3-214ENST00000560402 TLCD2A6NGC4 264 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 SPAG6O75602 509 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 ECHS1P30084 290 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 PMS2P54278 862 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 FOXK1P85037 733 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 TUBB3Q13509 450 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms