RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 TMPRSS3P57727 454 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 PRAMEP78395 509 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 SARNPP82979 210 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 BOP1Q14137 746 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 BROXQ5VW32 411 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 ANKRD22Q5VYY1 191 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 KLHL35Q6PF15 583 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 CARFQ8N187 725 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 NAT8LQ8N9F0 302 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 OR6P1Q8NGX9 317 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 SLC41A2Q96JW4 573 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 CD180Q99467 661 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 P2RY12Q9H244 342 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 TFB2MQ9H5Q4 396 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 SYBUQ9NX95 663 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 MARCH4Q9P2E8 410 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 PYCARDQ9ULZ3 195 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 TMEM184BQ9Y519 407 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 FANCGO15287 622 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 CD3EAPO15446 510 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 KIF1CO43896 1103 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 AVILO75366 819 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TMEM63AO94886 807 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 NELFEP18615 380 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 IVDP26440 423 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 MAPK9P45984 424 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TTPAP49638 278 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 VAC14Q08AM6 782 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TGIF1Q15583 401 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 KCTD19Q17RG1 926 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 AARS2Q5JTZ9 985 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 SNAP47Q5SQN1 464 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 DUS1LQ6P1R4 473 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 GPR155Q7Z3F1 870 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TMEM135Q86UB9 458 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 ZFAND4Q86XD8 727 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 ACVR1CQ8NER5 493 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 GRK7Q8WTQ7 553 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 UBXN4Q92575 508 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TFGQ92734 400 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 NKD1Q969G9 470 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TGM7Q96PF1 710 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
SMAD3-213ENST00000560175 CATSPERZQ9NTU4 200 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 PILRAQ9UKJ1 303 aa12.87□□□□□ -0.35
SMAD3-213ENST00000560175 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 F8W8V4 182 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 STMND1H3BQB6 276 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-213ENST00000560175 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 PTGIRP43119 386 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 PPP1CAP62136 330 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 IL11RAQ14626 422 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 GSE1Q14687 1217 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 TYSND1Q2T9J0 566 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 CACHD1Q5VU97 1274 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 ANKS6Q68DC2 871 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 KIAA0930Q6ICG6 404 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-213ENST00000560175 ZNF449Q6P9G9 518 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 KMT5CQ86Y97 462 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 LSM14AQ8ND56 463 aaKnown RBP12.86□□□□□ -0.35
SMAD3-213ENST00000560175 SIGLEC10Q96LC7 697 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 FCRL3Q96P31 734 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-213ENST00000560175 SERPINB12Q96P63 405 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 TCF12Q99081 682 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 HRASLS2Q9NWW9 162 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 ANAPC5Q9UJX4 755 aa12.86□□□□□ -0.35
SMAD3-213ENST00000560175 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
SMAD3-213ENST00000560175 IGHV5-51A0A0C4DH38 117 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 TLCD2A6NGC4 264 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 SDR42E2A6NKP2 422 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 AGRPO00253 132 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 MATN2O00339 956 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 IFRD1O00458 451 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 POLR1CO15160 346 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 VAPBO95292 243 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms