RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
CRTC3-208ENST00000560098 ARGFXA6NJG6 315 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 TTLL8A6PVC2 850 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 AGAP14A8MT82 685 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 MATN2O00339 956 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 PRLHRP49683 370 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 CHAF1BQ13112 559 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 TBX2Q13207 712 aaPredicted RBP16.93■□□□□ 0.3
CRTC3-208ENST00000560098 OLIG2Q13516 323 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 C11orf63Q6NUN7 778 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 LILRA3Q8N6C8 439 aaPredicted RBP16.93■□□□□ 0.3
CRTC3-208ENST00000560098 HM13Q8TCT9 377 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 CPT1BQ92523 772 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 ULK4Q96C45 1275 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 TLR10Q9BXR5 811 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 ING2Q9H160 280 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 ACSS2Q9NR19 701 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 C1GALT1Q9NS00 363 aa16.93■□□□□ 0.3
CRTC3-208ENST00000560098 SLC9B1P1A6NJY1 282 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 MEN1O00255 615 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 VPS4BO75351 444 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 CRTAMO95727 393 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 CDH3P22223 829 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 CCL11P51671 97 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 COPS2P61201 443 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 PRPSAP1Q14558 356 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 ANKRD20A2Q5SQ80 823 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 PLEKHS1Q5SXH7 462 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 ANKRD20A1Q5TYW2 823 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 PRAMEF17Q5VTA0 474 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 ANKRD20A3Q5VUR7 823 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 DSELQ8IZU8 1212 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 NXPE1Q8N323 547 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 EFCAB3Q8N7B9 438 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 ACVR1CQ8NER5 493 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 OR13C4Q8NGS5 318 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 HEXDCQ8WVB3 486 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 COPS8Q99627 209 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 SYTL2Q9HCH5 934 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 VPS4AQ9UN37 437 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 SNX7Q9UNH6 387 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 TFR2Q9UP52 801 aa16.92■□□□□ 0.3
CRTC3-208ENST00000560098 C17orf113A0A1B0GUU1 675 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 BLACEA4D250 179 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 CFAP99D6REC4 459 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 DDX3YO15523 660 aaKnown RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 LCA5LO95447 670 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 RAB40ALP0C0E4 278 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 ATP1B2P14415 290 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 ITGALP20701 1170 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 PSMB4P28070 264 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 HADHAP40939 763 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 PTGIRP43119 386 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 TMPRSS15P98073 1019 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 ABRQ12979 859 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 MSLNQ13421 630 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 PAPD7Q5XG87 772 aaKnown RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 LCN10Q6JVE6 187 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 SNX20Q7Z614 316 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 CDKL3Q8IVW4 592 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 ENDOVQ8N8Q3 282 aaKnown RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 CPT1CQ8TCG5 803 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 ADAMTS17Q8TE56 1095 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 LCN9Q8WX39 176 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 CLIP3Q96DZ5 547 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 FERD3LQ96RJ6 166 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 C19orf43Q9BQ61 176 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 NLNQ9BYT8 704 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 SRMSQ9H3Y6 488 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 FAM96AQ9H5X1 160 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 PCDHA13Q9Y5I0 950 aa16.91■□□□□ 0.3
CRTC3-208ENST00000560098 USP9YO00507 2555 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-208ENST00000560098 MACROD2A1Z1Q3 448 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 GSAPA4D1B5 854 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 STK10O94804 968 aaKnown RBP16.9■□□□□ 0.3
CRTC3-208ENST00000560098 MSL3P1P0C860 447 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 PRDX3P30048 256 aaKnown RBP16.9■□□□□ 0.3
CRTC3-208ENST00000560098 RORAP35398 523 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 UQCRFS1P47985 274 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 PREPP48147 710 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 ZNF140P52738 457 aaPredicted RBP16.9■□□□□ 0.3
CRTC3-208ENST00000560098 NADK2Q4G0N4 442 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 GALNT11Q8NCW6 608 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 TCFL5Q9UL49 500 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 EFR3BQ9Y2G0 817 aa16.9■□□□□ 0.3
CRTC3-208ENST00000560098 USP9XQ93008 2570 aaPredicted RBP16.9■□□□□ 0.3
CRTC3-208ENST00000560098 UTP20O75691 2785 aaKnown RBP16.9■□□□□ 0.3
CRTC3-208ENST00000560098 TMEM150CB9EJG8 249 aa16.89■□□□□ 0.29
CRTC3-208ENST00000560098 IFRD1O00458 451 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-208ENST00000560098 KCNN4O15554 427 aa16.89■□□□□ 0.29
CRTC3-208ENST00000560098 MAP3K7O43318 606 aa16.89■□□□□ 0.29
CRTC3-208ENST00000560098 RBP3P10745 1247 aa16.89■□□□□ 0.29
CRTC3-208ENST00000560098 ST6GAL1P15907 406 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms