RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DSELQ8IZU8 1212 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
TPM1-220ENST00000559556 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 CPT1BQ92523 772 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 GORASP1Q9BQQ3 440 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 ING2Q9H160 280 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 CHST8Q9H2A9 424 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 VPS4AQ9UN37 437 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 PCDHGB7Q9Y5F8 929 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 MATN2O00339 956 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 KLK3P07288 261 aaPredicted RBP12.74□□□□□ -0.37
TPM1-220ENST00000559556 GNLYP22749 145 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 NDUFS1P28331 727 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 RORAP35398 523 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ARCN1P48444 511 aaKnown RBP12.74□□□□□ -0.37
TPM1-220ENST00000559556 PRLHRP49683 370 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 LLGL1Q15334 1064 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 TAF1AQ15573 450 aaPredicted RBP12.74□□□□□ -0.37
TPM1-220ENST00000559556 NADK2Q4G0N4 442 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ARMC6Q6NXE6 501 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 FAM198BQ6UWH4 519 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 DAAM2Q86T65 1068 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 KATNAL2Q8IYT4 538 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ENDOVQ8N8Q3 282 aaKnown RBP12.74□□□□□ -0.37
TPM1-220ENST00000559556 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 HM13Q8TCT9 377 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 TLR10Q9BXR5 811 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 NLNQ9BYT8 704 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 GBA3Q9H227 469 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ASB8Q9H765 288 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 SYTL2Q9HCH5 934 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 C1GALT1Q9NS00 363 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 FAM8A1Q9UBU6 413 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 TCFL5Q9UL49 500 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 SNX7Q9UNH6 387 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 MAP4K5Q9Y4K4 846 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 HEBP2Q9Y5Z4 205 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 CSMD1Q96PZ7 3565 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 GTF3C1Q12789 2109 aa12.74□□□□□ -0.37
TPM1-220ENST00000559556 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 C2orf81A6NN90 581 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 MEN1O00255 615 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 CBFA2T2O43439 604 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 ANXA9O76027 345 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 SRP72O76094 671 aaKnown RBP12.73□□□□□ -0.37
TPM1-220ENST00000559556 AGFG2O95081 481 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 CAPN1P07384 714 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 TPM1P09493 284 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 POLR2CP19387 275 aaPredicted RBP12.73□□□□□ -0.37
TPM1-220ENST00000559556 CDH3P22223 829 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 ADRA1AP35348 466 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 CCL11P51671 97 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 GEMP55040 296 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 XIAPP98170 497 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 PRKAA1Q13131 559 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 BBS12Q6ZW61 710 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 HPS6Q86YV9 775 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 VSTM4Q8IW00 320 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 LILRA3Q8N6C8 439 aaPredicted RBP12.73□□□□□ -0.37
TPM1-220ENST00000559556 ACVR1CQ8NER5 493 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 HAUS1Q96CS2 278 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 C19orf43Q9BQ61 176 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 CCM2Q9BSQ5 444 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 FICDQ9BVA6 458 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 GOLPH3Q9H4A6 298 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 PLEKHB1Q9UF11 243 aaPredicted RBP12.73□□□□□ -0.37
TPM1-220ENST00000559556 FKBPLQ9UIM3 349 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 COLEC10Q9Y6Z7 277 aa12.73□□□□□ -0.37
TPM1-220ENST00000559556 CELSR1Q9NYQ6 3014 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 C5orf60A6NFR6 353 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 SLC9B1P1A6NJY1 282 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 APOC4-APOC2K7ER74 178 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 TMEM63AO94886 807 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 AGTP01019 485 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 APOC2P02655 101 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 RALBP11234 206 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 VAV2P52735 878 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
TPM1-220ENST00000559556 ZNF658BQ4V348 819 aaPredicted RBP12.72□□□□□ -0.37
TPM1-220ENST00000559556 C4orf17Q53FE4 359 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 ITPRIPL1Q6GPH6 555 aa12.72□□□□□ -0.37
TPM1-220ENST00000559556 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
TPM1-220ENST00000559556 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms