RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SH3KBP1Q96B97 665 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 TTC1Q99614 292 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 LRRC1Q9BTT6 524 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 VPS37BQ9H9H4 285 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 UCK1Q9HA47 277 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
CASC4-209ENST00000559222 IGF2RP11717 2491 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 KLHL33A6NCF5 533 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 DUX1O43812 170 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 PROS1P07225 676 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 THRAP10827 490 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 RPS3P23396 243 aaKnown RBP eCLIP18.25■□□□□ 0.511e-8■■■□□ 19
CASC4-209ENST00000559222 ETV5P41161 510 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 ABCG1P45844 678 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 LEPRP48357 1165 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 LIMK2P53671 638 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 EPHA4P54764 986 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 ARL4CP56559 192 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 GPLD1P80108 840 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 PDIA2Q13087 525 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 SQSTM1Q13501 440 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 THOC5Q13769 683 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 RTP5Q14D33 572 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 SYTL3Q4VX76 610 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 PTRHD1Q6GMV3 140 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 PDIK1LQ8N165 341 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 ZCCHC14Q8WYQ9 949 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 NXPE2Q96DL1 559 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 AHCYL2Q96HN2 611 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 CARD6Q9BX69 1037 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 NRSN2Q9GZP1 204 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 ZMYND15Q9H091 742 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 WHRNQ9P202 907 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 KLHL3Q9UH77 587 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 GNPTGQ9UJJ9 305 aa18.25■□□□□ 0.51
CASC4-209ENST00000559222 TSR3Q9UJK0 312 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 MAP1BP46821 2468 aaKnown RBP18.25■□□□□ 0.51
CASC4-209ENST00000559222 CCDC187A0A096LP49 1063 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 A8MU76 341 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 E7ESA3 106 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 QSOX1O00391 747 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 LIN7AO14910 233 aaPredicted RBP18.24■□□□□ 0.51
CASC4-209ENST00000559222 UBXN7O94888 489 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 ITIH1P19827 911 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 AOAHP28039 575 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 ACADLP28330 430 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 SPANXN3Q5MJ09 141 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 STEAP4Q687X5 459 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 CNSTQ6PJW8 725 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
CASC4-209ENST00000559222 AVL9Q8NBF6 648 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 FBXO36Q8NEA4 188 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 OR4D9Q8NGE8 314 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 OR5AR1Q8NGP9 310 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 LIN37Q96GY3 246 aaPredicted RBP18.24■□□□□ 0.51
CASC4-209ENST00000559222 TMEM74Q96NL1 305 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 SLC30A3Q99726 388 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 ZC3H7BQ9UGR2 993 aaKnown RBP18.24■□□□□ 0.51
CASC4-209ENST00000559222 SLC24A2Q9UI40 661 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 RUVBL2Q9Y230 463 aaKnown RBP18.24■□□□□ 0.51
CASC4-209ENST00000559222 MED16Q9Y2X0 877 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 AK5Q9Y6K8 562 aa18.24■□□□□ 0.51
CASC4-209ENST00000559222 FREM2Q5SZK8 3169 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 TLX3O43711 291 aaPredicted RBP18.23■□□□□ 0.51
CASC4-209ENST00000559222 GPC4O75487 556 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 GSTM1P09488 218 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 GABRB3P28472 473 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 PPARGP37231 505 aaPredicted RBP18.23■□□□□ 0.51
CASC4-209ENST00000559222 GSTM4Q03013 218 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 HSPA14Q0VDF9 509 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 RPA4Q13156 261 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 PRKG2Q13237 762 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 TMEM71Q6P5X7 295 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 CAPN12Q6ZSI9 719 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 RAB11FIP2Q7L804 512 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 LRRN4CLQ8ND94 238 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 GIMAP7Q8NHV1 300 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 ART4Q93070 314 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 PMEPA1Q969W9 287 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 CERS2Q96G23 380 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 FERD3LQ96RJ6 166 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 CCDC86Q9H6F5 360 aaKnown RBP18.23■□□□□ 0.51
CASC4-209ENST00000559222 KIR3DX1Q9H7L2 352 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 POLR1BQ9H9Y6 1135 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 ASCL3Q9NQ33 180 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 CIDEBQ9UHD4 219 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 FBXO5Q9UKT4 447 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 LOXL2Q9Y4K0 774 aa18.23■□□□□ 0.51
CASC4-209ENST00000559222 MN1Q10571 1320 aaPredicted RBP18.23■□□□□ 0.51
CASC4-209ENST00000559222 KRT87PA6NCN2 255 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 KIF2AO00139 706 aaPredicted RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 SMAPO00193 183 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 KIF1CO43896 1103 aaKnown RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 PIAS1O75925 651 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 HAUS5O94927 633 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 TPBGLP0DKB5 382 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms