RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 RIMS4Q9H426 269 aaPredicted RBP10.88□□□□□ -0.67
SEMA4B-204ENST00000558065 ASH2LQ9UBL3 628 aa10.88□□□□□ -0.67
SEMA4B-204ENST00000558065 CD300AQ9UGN4 299 aa10.88□□□□□ -0.67
SEMA4B-204ENST00000558065 PCDHA2Q9Y5H9 948 aa10.88□□□□□ -0.67
SEMA4B-204ENST00000558065 ADGRA2Q96PE1 1338 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 M0R2N6 131 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 SLC31A2O15432 143 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 MED26O95402 600 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 GP1BAP07359 652 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 INHBAP08476 426 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ATP6V1B2P21281 511 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 MYL9P24844 172 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CD6P30203 668 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 GLUD2P49448 558 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CASP9P55211 416 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ACTR1AP61163 376 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 TRAF3Q13114 568 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ART3Q13508 389 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 RFX4Q33E94 735 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ANKRD22Q5VYY1 191 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 MTFMTQ96DP5 389 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 C19orf60Q96EN9 201 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CPXM1Q96SM3 734 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 AGPAT1Q99943 283 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 GLOD4Q9HC38 313 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CHRAC1Q9NRG0 131 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PDE10AQ9Y233 779 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 AP1M2Q9Y6Q5 423 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 DENND4AQ7Z401 1863 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 B4DXG7 233 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 TGM6O95932 706 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 FGL2Q14314 439 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 C9orf131Q5VYM1 1079 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 C3orf33Q6P1S2 294 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 RTL4Q6ZR62 310 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CERS5Q8N5B7 392 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 XXYLT1Q8NBI6 393 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 BRI3BPQ8WY22 251 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CENPNQ96H22 339 aaPredicted RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 SORCS2Q96PQ0 1159 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CSPG4P5Q96PW8 444 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CCM2Q9BSQ5 444 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ING2Q9H160 280 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 DBNDD1Q9H9R9 158 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 SDHAF2Q9NX18 166 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PURGQ9UJV8 347 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PSMD9O00233 223 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 SCAMP1O15126 338 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PRG2P13727 222 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PSMD4P55036 377 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PON3Q15166 354 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 MAPKAPK3Q16644 382 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CTU2Q2VPK5 515 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 TREML2Q5T2D2 321 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 FAM182BQ5T319 152 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 RBMS3Q6XE24 437 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 CCDC190Q86UF4 302 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 IGDCC3Q8IVU1 814 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 GDPD1Q8N9F7 314 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ZNF540Q8NDQ6 660 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 LARP4BQ92615 738 aaKnown RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 DNAJC19Q96DA6 116 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 HYLS1Q96M11 299 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 QRFPRQ96P65 431 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 RBP7Q96R05 134 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ALX4Q9H161 411 aaPredicted RBP10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 EPHA6Q9UF33 1036 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 NDRG3Q9UGV2 375 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 GGA1Q9UJY5 639 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 KCNH4Q9UQ05 1017 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 TRAPPC4Q9Y296 219 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 MED16Q9Y2X0 877 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ASB4Q9Y574 426 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 PEX16Q9Y5Y5 336 aa10.87□□□□□ -0.67
SEMA4B-204ENST00000558065 ASB14A6NK59 587 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 GPR171O14626 319 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 SLITRK3O94933 977 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 PGDP52209 483 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 ATXN1P54253 815 aaKnown RBP10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 ZNF33AQ06730 810 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 FRG1Q14331 258 aaKnown RBP10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 SEC23BQ15437 767 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 TBCELQ5QJ74 424 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 CLEC2AQ6UVW9 174 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 OTOP1Q7RTM1 612 aa10.86□□□□□ -0.67
SEMA4B-204ENST00000558065 DNAAF3Q8N9W5 541 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms