RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ARHGAP6O43182 974 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 CPNE3O75131 537 aaKnown RBP14.26□□□□□ -0.13
SHMT2-235ENST00000557740 CREG1O75629 220 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 ATP1B2P14415 290 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-235ENST00000557740 MC4RP32245 332 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 CASRP41180 1078 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 GPR33Q49SQ1 333 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 ZRANB3Q5FWF4 1079 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 DENND5AQ6IQ26 1287 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 ZNF449Q6P9G9 518 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 TAS2R42Q7RTR8 314 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 PEX26Q7Z412 305 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 TMEM126BQ8IUX1 230 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 SYCE1Q8N0S2 351 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 TXLNBQ8N3L3 684 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 D2HGDHQ8N465 521 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 LILRA3Q8N6C8 439 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-235ENST00000557740 FAM71DQ8N9W8 422 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 OR8K5Q8NH50 307 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 DNAJC1Q96KC8 554 aaKnown RBP14.26□□□□□ -0.13
SHMT2-235ENST00000557740 ACTL8Q9H568 366 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 LRRC40Q9H9A6 602 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 FANCEQ9HB96 536 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 ARNT2Q9HBZ2 717 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 MAN2B2Q9Y2E5 1009 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 GSAPA4D1B5 854 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 AGAP14A8MT82 685 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
SHMT2-235ENST00000557740 SGTAO43765 313 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 RFPL1O75677 317 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 SCRG1O75711 98 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 NTRK1P04629 796 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 POLR2CP19387 275 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-235ENST00000557740 CDH3P22223 829 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 ACRV1P26436 265 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 KPNA2P52292 529 aaKnown RBP14.25□□□□□ -0.13
SHMT2-235ENST00000557740 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-235ENST00000557740 GPR19Q15760 415 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 PARP6Q2NL67 630 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 P3H1Q32P28 736 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 CAPRIN2Q6IMN6 1127 aaKnown RBP14.25□□□□□ -0.13
SHMT2-235ENST00000557740 ACVR1CQ8NER5 493 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 OR4E2Q8NGC2 313 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 LCN9Q8WX39 176 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 SEC14L1Q92503 715 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 ALS2CR12Q96Q35 445 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 SRMSQ9H3Y6 488 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 COG4Q9H9E3 785 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 KCND1Q9NSA2 647 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 ZDHHC3Q9NYG2 299 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 POMT2Q9UKY4 750 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 BTRCQ9Y297 605 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 TP53TG5Q9Y2B4 290 aa14.25□□□□□ -0.13
SHMT2-235ENST00000557740 C17orf113A0A1B0GUU1 675 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 LDB2O43679 373 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 RECKO95980 971 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 PMS2P54278 862 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 RPS15P62841 145 aaKnown RBP14.24□□□□□ -0.13
SHMT2-235ENST00000557740 POU6F1Q14863 301 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 TMEM135Q86UB9 458 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 SERPINA9Q86WD7 417 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 KLHDC8BQ8IXV7 354 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 MR1Q95460 341 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 FERD3LQ96RJ6 166 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 BAG1Q99933 345 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-235ENST00000557740 TLR10Q9BXR5 811 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 GPR87Q9BY21 358 aa14.24□□□□□ -0.13
SHMT2-235ENST00000557740 NLE1Q9NVX2 485 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-235ENST00000557740 PACSIN2Q9UNF0 486 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-235ENST00000557740 UBR5O95071 2799 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-235ENST00000557740 NBASA2RRP1 2371 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 IGLV3-16A0A075B6K0 115 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 TRBV5-4A0A0C4DH59 114 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 MAP3K7O43318 606 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 FTCDO95954 541 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 FURINP09958 794 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 TPH1P17752 444 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 PTPN4P29074 926 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 CDKN1CP49918 316 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-235ENST00000557740 CACNG1Q06432 222 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 KIF5AQ12840 1032 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 KLRB1Q12918 225 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 KCTD11Q693B1 232 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 TCTN3Q6NUS6 607 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 FAM199XQ6PEV8 388 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-235ENST00000557740 FBXO38Q6PIJ6 1188 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 TAB3Q8N5C8 712 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-235ENST00000557740 ZNF501Q96CX3 271 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-235ENST00000557740 PPM1MQ96MI6 270 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 HGH1Q9BTY7 390 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 RBSNQ9H1K0 784 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 OR52A5Q9H2C5 316 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 MVB12BQ9H7P6 319 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 LATS2Q9NRM7 1088 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 C1GALT1Q9NS00 363 aa14.23□□□□□ -0.13
SHMT2-235ENST00000557740 PTPN13Q12923 2485 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 SLC9B1P1A6NJY1 282 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 H7C0S8 307 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 PSMD3O43242 534 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms