RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SEPT11Q9NVA2 429 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 NOCTQ9UK39 431 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 NPIPA1Q9UND3 350 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 MRPS2Q9Y399 296 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 SVEP1Q4LDE5 3571 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 ARHGAP42A6NI28 874 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CHUKO15111 745 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 KMOO15229 486 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 USP1O94782 785 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PRAMEF1O95521 474 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ST6GAL1P15907 406 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 POLR2CP19387 275 aaPredicted RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 KRT9P35527 623 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 HALP42357 657 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 GABRB2P47870 512 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PMS1P54277 932 aaKnown RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 DLX5P56178 289 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 OLIG2Q13516 323 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 SNTB1Q13884 538 aaKnown RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 GALNT3Q14435 633 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PCBP2Q15366 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 RPE65Q16518 533 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 RBBP7Q16576 425 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 QPCTQ16769 361 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 KRTCAP3Q53RY4 240 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 Q5PR19 223 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ARMC12Q5T9G4 340 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PODNL1Q6PEZ8 512 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 SHISA6Q6ZSJ9 500 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CDHR3Q6ZTQ4 885 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ADGRG6Q86SQ4 1221 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 LRRTM4Q86VH4 590 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CCDC71Q8IV32 467 aaPredicted RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF547Q8IVP9 402 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 GPR135Q8IZ08 494 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 VWA5B2Q8N398 1253 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 SUN3Q8TAQ9 357 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CCDC110Q8TBZ0 833 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PIH1D2Q8WWB5 315 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PSMF1Q92530 271 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 HDAC10Q969S8 669 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 C18orf8Q96DM3 657 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 PSKH2Q96QS6 385 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 SLC39A8Q9C0K1 460 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CATSPERBQ9H7T0 1116 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF160Q9HCG1 818 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 METTL5Q9NRN9 209 aaKnown RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 SLC22A11Q9NSA0 550 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 POMT2Q9UKY4 750 aa9.06□□□□□ -0.96
NEDD1-211ENST00000557454 CFAP20Q9Y6A4 193 aaKnown RBP9.06□□□□□ -0.96
NEDD1-211ENST00000557454 ANKRD12Q6UB98 2062 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 PRRG2O14669 202 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 P4HA2O15460 535 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 VEGFDO43915 354 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 YEATS4O95619 227 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 MYL1P05976 194 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 UQCRHP07919 91 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 PDHA1P08559 390 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 RENBPP51606 427 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 FKBP3Q00688 224 aaKnown RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 ALDH6A1Q02252 535 aaKnown RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 SLC10A7Q0GE19 358 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 RFTN1Q14699 578 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 DEFB110Q30KQ9 67 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 CCDC14Q49A88 953 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 HIBCHQ6NVY1 386 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 FGD2Q7Z6J4 655 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 KBTBD2Q8IY47 623 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 GPT2Q8TD30 523 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 ZFPM2Q8WW38 1151 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 NTAN1Q96AB6 310 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 Q96MF0 132 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 NUDCD1Q96RS6 583 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 SPSB2Q99619 263 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 DMRT3Q9NQL9 472 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 TXLNGQ9NUQ3 528 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 PSMD13Q9UNM6 376 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 PPIL1Q9Y3C6 166 aa9.05□□□□□ -0.96
NEDD1-211ENST00000557454 CHD3Q12873 2000 aaKnown RBP9.05□□□□□ -0.96
NEDD1-211ENST00000557454 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 GSAPA4D1B5 854 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 OR5H15A6NDH6 313 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 A6NNC1 897 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 IDSB3KWA1 339 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 GPR89AB7ZAQ6 455 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 H3BMH7 237 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 DFFAO00273 331 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 FGF10O15520 208 aaPredicted RBP9.04□□□□□ -0.96
NEDD1-211ENST00000557454 PHF1O43189 567 aaPredicted RBP9.04□□□□□ -0.96
NEDD1-211ENST00000557454 MTX2O75431 263 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 OR2B3O76000 313 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 CLDN7O95471 211 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 MLYCDO95822 493 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 HPP00738 406 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms