RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNF789Q5FWF6 425 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
SLIRP-210ENST00000557431 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 CFAP206Q8IYR0 622 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 OR4K2Q8NGD2 314 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ZNF398Q8TD17 642 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 FICDQ9BVA6 458 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ASB8Q9H765 288 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 KIR3DX1Q9H7L2 352 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 SLAMF7Q9NQ25 335 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 POMT2Q9UKY4 750 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ZNF451Q9Y4E5 1061 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 BTN3A3O00478 584 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 AKR1B10O60218 316 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 KCNJ13O60928 360 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 CEACAM4O75871 244 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 CLDN1O95832 211 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 KLK3P07288 261 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-210ENST00000557431 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 ZFXP17010 805 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-210ENST00000557431 COMTP21964 271 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 OTX2P32243 289 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 RORAP35398 523 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 CDKN2BP42772 138 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 TPM4P67936 248 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 DEFB110Q30KQ9 67 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 TMTC4Q5T4D3 741 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 IZUMO3Q5VZ72 239 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 PHC3Q8NDX5 983 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 OR2L2Q8NH16 312 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 CPT1BQ92523 772 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 FCRL5Q96RD9 977 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
SLIRP-210ENST00000557431 TRABDQ9H4I3 376 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 XKR8Q9H6D3 395 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-210ENST00000557431 RSPH14Q9UHP6 348 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 ERRFI1Q9UJM3 462 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-210ENST00000557431 PKP3Q9Y446 797 aa13.69□□□□□ -0.22
SLIRP-210ENST00000557431 BTN3A1O00481 513 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 HCRTR1O43613 425 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 SPOPO43791 374 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 DPM1O60762 260 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 CTSBP07858 339 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 CYP2A7P20853 494 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 VAV2P52735 878 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 GSDMDP57764 484 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 KRT33BQ14525 404 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 NR6A1Q15406 480 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-210ENST00000557431 SEC14L1Q92503 715 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 FERD3LQ96RJ6 166 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 FSD1LQ9BXM9 530 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 NLNQ9BYT8 704 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 ASF1BQ9NVP2 202 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 SMOXQ9NWM0 555 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 GPR83Q9NYM4 423 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 HACD3Q9P035 362 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 TFR2Q9UP52 801 aa13.68□□□□□ -0.22
SLIRP-210ENST00000557431 DNMT3AQ9Y6K1 912 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-210ENST00000557431 MYO7BQ6PIF6 2116 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 GOLGA6L19H0YKK7 550 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 LDB2O43679 373 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 CBSLP0DN79 551 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PTMSP20962 102 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PDHA2P29803 388 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 CBSP35520 551 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PREPP48147 710 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 XIAPP98170 497 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PRKAA1Q13131 559 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PRKG2Q13237 762 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 MPP3Q13368 585 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 PLEKHN1Q494U1 663 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 C1orf189Q5VU69 101 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 VSIG1Q86XK7 387 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 CISD2Q8N5K1 135 aaKnown RBP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 LRFN5Q96NI6 719 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 QKIQ96PU8 341 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLIRP-210ENST00000557431 FAM118BQ9BPY3 351 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 HGH1Q9BTY7 390 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 SLC7A5P2Q9GIP4 190 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 FANCEQ9HB96 536 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms