RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ACVR1Q04771 509 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 PWP1Q13610 501 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 ZNF404Q494X3 552 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 FUT11Q495W5 492 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 ANKS6Q68DC2 871 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 CAPN13Q6MZZ7 669 aaPredicted RBP12.37□□□□□ -0.43
APEX1-216ENST00000557159 HFE2Q6ZVN8 426 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
APEX1-216ENST00000557159 UBE2Q1Q7Z7E8 422 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 OR7G1Q8NGA0 311 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 PROKR1Q8TCW9 393 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 TMEM40Q8WWA1 233 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
APEX1-216ENST00000557159 KIAA1191Q96A73 305 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 PAWRQ96IZ0 340 aaKnown RBP12.37□□□□□ -0.43
APEX1-216ENST00000557159 SIGLEC11Q96RL6 698 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 SCN3BQ9NY72 215 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.37□□□□□ -0.435e-6■□□□□ 8
APEX1-216ENST00000557159 GIMAP2Q9UG22 337 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 ORC6Q9Y5N6 252 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 PTGDR2Q9Y5Y4 395 aa12.37□□□□□ -0.43
APEX1-216ENST00000557159 METTL15A6NJ78 407 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 BCKDKO14874 412 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 TSPAN8P19075 237 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 MSH3P20585 1137 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 NR4A1P22736 598 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 DCTP40126 519 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 LHX1P48742 406 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 NDUFV1P49821 464 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
APEX1-216ENST00000557159 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 NPTX1Q15818 432 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 CATSPEREQ5SY80 951 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 UBE2UQ5VVX9 321 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 AFMIDQ63HM1 303 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SNX29P2Q8IUI4 249 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SIMC1Q8NDZ2 872 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 MCFD2Q8NI22 146 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 CAPSLQ8WWF8 208 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 RPL10LQ96L21 214 aaKnown RBP12.36□□□□□ -0.43
APEX1-216ENST00000557159 ZNF583Q96ND8 569 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 NACA2Q9H009 215 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SLC25A51Q9H1U9 297 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 CCDC177Q9NQR7 707 aaPredicted RBP12.36□□□□□ -0.43
APEX1-216ENST00000557159 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 TMEFF2Q9UIK5 374 aaPredicted RBP12.36□□□□□ -0.43
APEX1-216ENST00000557159 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 BTRCQ9Y297 605 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
APEX1-216ENST00000557159 GBF1Q92538 1859 aa12.36□□□□□ -0.43
APEX1-216ENST00000557159 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 AXIN1O15169 862 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 TPD52L2O43399 206 aaKnown RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 EFNA1P20827 205 aaPredicted RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 NRIP1P48552 1158 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 VBP1P61758 197 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 AGAP6Q5VW22 663 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 ARL10Q8N8L6 244 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 ZNF548Q8NEK5 533 aaPredicted RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 PSMA8Q8TAA3 256 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 STAG3L4Q8TBR4 150 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 SLC47A1Q96FL8 570 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 AGAP4Q96P64 663 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 SH3GL1Q99961 368 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 EMILIN2Q9BXX0 1053 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 ULBP1Q9BZM6 244 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 DERL2Q9GZP9 239 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 TKTL2Q9H0I9 626 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 ACTR8Q9H981 624 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 SYTL2Q9HCH5 934 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 RGS18Q9NS28 235 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
APEX1-216ENST00000557159 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 NEUROG3Q9Y4Z2 214 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
APEX1-216ENST00000557159 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 C9JVG2 144 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ARVCFO00192 962 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PPP6CO00743 305 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 HAT1O14929 419 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 GPR182O15218 404 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 BEST1O76090 585 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SIX3O95343 332 aaPredicted RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 HLA-DQB2P05538 268 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 TGFBR2P37173 567 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms