RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 COMMD10Q9Y6G5 202 aa11.21□□□□□ -0.61
SRP54-213ENST00000556994 ANKRD36A6QL64 1941 aa11.21□□□□□ -0.61
SRP54-213ENST00000556994 GBF1Q92538 1859 aa11.21□□□□□ -0.61
SRP54-213ENST00000556994 DYTNA2CJ06 578 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 SLC1A7O00341 560 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 MITFO75030 526 aaPredicted RBP11.21□□□□□ -0.62
SRP54-213ENST00000556994 E2F6O75461 281 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.62
SRP54-213ENST00000556994 GUCA1CO95843 209 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 PCMT1P22061 227 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 MC4RP32245 332 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 HPCAL1P37235 193 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ISL1P61371 349 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 IL1RL1Q01638 556 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 OCA2Q04671 838 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 FPGSQ05932 587 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 TRIM32Q13049 653 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 TUSC3Q13454 348 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 DNASE1L3Q13609 305 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 FAM174BQ3ZCQ3 159 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 AFTPHQ6ULP2 937 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 CXCL17Q6UXB2 119 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 GALNT5Q7Z7M9 940 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ATAD1Q8NBU5 361 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 CLHC1Q8NHS4 586 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 NDNFQ8TB73 568 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 PEX13Q92968 403 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.62
SRP54-213ENST00000556994 ABHD8Q96I13 439 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ZNF382Q96SR6 550 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ALOXE3Q9BYJ1 711 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ZFP14Q9HCL3 533 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 HEBP1Q9NRV9 189 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 FARSBQ9NSD9 589 aaKnown RBP11.21□□□□□ -0.62
SRP54-213ENST00000556994 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 MARCH2Q9P0N8 246 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 MTRRQ9UBK8 725 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 ENPP5Q9UJA9 477 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 B3GNT3Q9Y2A9 372 aa11.21□□□□□ -0.62
SRP54-213ENST00000556994 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
SRP54-213ENST00000556994 ARVCFO00192 962 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ARNTLO00327 626 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 KPNA4O00629 521 aaPredicted RBP11.2□□□□□ -0.62
SRP54-213ENST00000556994 OR7A17O14581 309 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 NDUFS2O75306 463 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 UGT2B11O75310 529 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 EPOP01588 193 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ITGB6P18564 788 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 MAP2K4P45985 399 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 EMX1Q04741 257 aaPredicted RBP11.2□□□□□ -0.62
SRP54-213ENST00000556994 PARP15Q460N3 678 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 SGO1Q5FBB7 561 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 NADSYN1Q6IA69 706 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 TAS2R42Q7RTR8 314 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
SRP54-213ENST00000556994 C10orf111Q8N326 155 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ZNF548Q8NEK5 533 aaPredicted RBP11.2□□□□□ -0.62
SRP54-213ENST00000556994 LPCAT1Q8NF37 534 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 NCLNQ969V3 563 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 PTPN18Q99952 460 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 FEM1AQ9BSK4 669 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 KATNAL1Q9BW62 490 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 SLC6A13Q9NSD5 602 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 C2orf81A6NN90 581 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 DRGXA6NNA5 263 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 CXCR6O00574 342 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 HPRP00739 348 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 FTH1P02794 183 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 CYP4B1P13584 511 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 HOXC8P31273 242 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 FMO3P31513 532 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 GDF5P43026 501 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 KCNQ1P51787 676 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 OXCT1P55809 520 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ARPP19P56211 112 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 VBP1P61758 197 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 IL5RAQ01344 420 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 CYP4F3Q08477 520 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 KIAA0040Q15053 153 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 OXA1LQ15070 435 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 MAPKAPK3Q16644 382 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 PGS1Q32NB8 556 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 PAGE2BQ5JRK9 111 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 TMEM236Q5W0B7 351 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 FRA10AC1Q70Z53 315 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 DET1Q7L5Y6 550 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 LGI2Q8N0V4 545 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 SLC13A3Q8WWT9 602 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 GTF2H4Q92759 462 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 RHBDF1Q96CC6 855 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ADAM2Q99965 735 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 RBM4BQ9BQ04 359 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms