RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ELOA3DA6NLF2 546 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TMEM150CB9EJG8 249 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 SMAD7O15105 426 aaKnown RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF749O43361 778 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 KLK8O60259 260 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 USP1O94782 785 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 KLHL18O94889 574 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 LETM1O95202 739 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ATE1O95260 518 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 UQCRHP07919 91 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 MSL3P1P0C860 447 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ITGAXP20702 1163 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 PREPP48147 710 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TAGLNQ01995 201 aaKnown RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 NRG1Q02297 640 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TFF3Q07654 80 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CETN1Q12798 172 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 HYAL2Q12891 473 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 PCBP2Q15366 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ELOA3BQ3SY89 546 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 PARP15Q460N3 678 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CATSPEREQ5SY80 951 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ZFYVE27Q5T4F4 411 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 OLFML1Q6UWY5 402 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ABRAXAS1Q6UWZ7 409 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 WASH2PQ6VEQ5 465 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CERS6Q6ZMG9 384 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 USP45Q70EL2 814 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 PHLDB2Q86SQ0 1253 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TRIM74Q86UV6 250 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 DOLPP1Q86YN1 238 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 NDUFAF2Q8N183 169 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 PPM1KQ8N3J5 372 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 NETO2Q8NC67 525 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 C1orf131Q8NDD1 294 aaKnown RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 ELOA3Q8NG57 546 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CCDC110Q8TBZ0 833 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 RND1Q92730 232 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TP53INP1Q96A56 240 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 COX14Q96I36 57 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 SPATA32Q96LK8 384 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 SARGQ9BW04 601 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 SPRTNQ9H040 489 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CARD9Q9H257 536 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CATSPERBQ9H7T0 1116 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 MRM3Q9HC36 420 aaKnown RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 METTL14Q9HCE5 456 aaKnown RBP5.56□□□□□ -1.52
ATXN3-245ENST00000556958 CDC23Q9UJX2 597 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 SIK3Q9Y2K2 1263 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 AP1M2Q9Y6Q5 423 aa5.56□□□□□ -1.52
ATXN3-245ENST00000556958 TLN2Q9Y4G6 2542 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 NKX2-6A6NCS4 301 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 FAM90A27PA6NNH2 459 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 GPR89AB7ZAQ6 455 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 FAM227AF5H4B4 570 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 J3QW42 95 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 TRAFD1O14545 582 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CETN3O15182 167 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 NUAK1O60285 661 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 MTA2O94776 668 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 PRAMEF1O95521 474 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 SOD1P00441 154 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CALCAP01258 141 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ATP1A1P05023 1023 aaKnown RBP5.55□□□□□ -1.52
ATXN3-245ENST00000556958 UMODP07911 640 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 GPR89BP0CG08 455 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF30P17039 623 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 FDXRP22570 491 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 HALP42357 657 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 KIR2DL3P43628 341 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 RENBPP51606 427 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 AP1S1P61966 158 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ALDH6A1Q02252 535 aaKnown RBP5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ABRQ12979 859 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CUL4BQ13620 913 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 SLC39A14Q15043 492 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 PCSK7Q16549 785 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 TUBB8Q3ZCM7 444 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CBWD6Q4V339 395 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CBWD3Q5JTY5 395 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CBWD5Q5RIA9 395 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 FBXW10Q5XX13 1052 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ATG9BQ674R7 924 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ALG1LQ6GMV1 187 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 BHLHB9Q6PI77 547 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 SHC4Q6S5L8 630 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 PRSS57Q6UWY2 283 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CEP128Q6ZU80 1094 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 FAM183BPQ6ZVS7 135 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 NCCRP1Q6ZVX7 275 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-245ENST00000556958 OOSP2Q86WS3 158 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ZZZ3Q8IYH5 903 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 GHDCQ8N2G8 530 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 OR1L3Q8NH93 324 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 PROKR1Q8TCW9 393 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ZFPM2Q8WW38 1151 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF606Q8WXB4 792 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 N4BP2L2Q92802 583 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-245ENST00000556958 SCAMP4Q969E2 229 aa5.55□□□□□ -1.52
ATXN3-245ENST00000556958 CCDC47Q96A33 483 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms