RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PLD3Q8IV08 490 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 APLFQ8IW19 511 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-221ENST00000556534 TAGAPQ8N103 731 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 SCML4Q8N228 414 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 CNBD1Q8NA66 436 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-221ENST00000556534 PRPF31Q8WWY3 499 aaKnown RBP4.22□□□□□ -1.73
SCFD1-221ENST00000556534 OR6C1Q96RD1 312 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 MXD3Q9BW11 206 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 OSGEPL1Q9H4B0 414 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 PDE7BQ9NP56 450 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 GIMAP4Q9NUV9 329 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 SNX8Q9Y5X2 465 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF541Q9H0D2 1346 aa4.21□□□□□ -1.73
SCFD1-221ENST00000556534 GPR75-ASB3A0A0A6YYF3 556 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 GLOD5A6NK44 160 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 HEPACAM2A8MVW5 462 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 PATE4P0C8F1 98 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 ERVK-10P10266 1014 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 GNAZP19086 355 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 EPHA2P29317 976 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 C15orf59Q2T9L4 293 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 OTUD3Q5T2D3 398 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 CFAP161Q6P656 301 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 GSG1LQ6UXU4 331 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 NME8Q8N427 588 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 ZNF843Q8N446 348 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 AFAP1Q8N556 730 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 CPSF7Q8N684 471 aaKnown RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 OR2AJ1Q8NGZ0 328 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 FAM76AQ8TAV0 307 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 TAS1R2Q8TE23 839 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 ZNF622Q969S3 477 aaKnown RBP eCLIP4.21□□□□□ -1.743e-6■□□□□ 8.1
SCFD1-221ENST00000556534 FBXO17Q96EF6 278 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 F2RL3Q96RI0 385 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 CDRT15Q96T59 188 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 MOV10L1Q9BXT6 1211 aaKnown RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 DPAGT1Q9H3H5 408 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 BICC1Q9H694 974 aaKnown RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 SLC52A3Q9NQ40 469 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 OLFML3Q9NRN5 406 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 OSER1Q9NX31 292 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 CHORDC1Q9UHD1 332 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 KIAA1210Q9ULL0 1709 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 FLT1P17948 1338 aa4.21□□□□□ -1.74
SCFD1-221ENST00000556534 SOS1Q07889 1333 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-221ENST00000556534 LOC100509620A0A075B734 347 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 FEZF1A0PJY2 475 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 ELOVL7A1L3X0 281 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 A8MV72 311 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 BLOC1S5-TXNDC5H3BN57 136 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 EDIL3O43854 480 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 OR10H2O60403 315 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 SOCS5O75159 536 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 BEST1O76090 585 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 ZWINTO95229 277 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 LIFP15018 202 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 SAT1P21673 171 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 BDNFP23560 247 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 HOXC8P31273 242 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 HSD17B4P51659 736 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 STAT2P52630 851 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 CRIP2P52943 208 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 TUBB4BP68371 445 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 TICAM2Q86XR7 235 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 FOXP4Q8IVH2 680 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 GUF1Q8N442 669 aaKnown RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 FBXO39Q8N4B4 442 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MINDY1Q8N5J2 469 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 PAPD5Q8NDF8 572 aaKnown RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 TRIM58Q8NG06 486 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 ZFAND2BQ8WV99 257 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 LPGAT1Q92604 370 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 JAKMIP2Q96AA8 810 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MTERF3Q96E29 417 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 NEK1Q96PY6 1258 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MRPL1Q9BYD6 325 aaKnown RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MMP27Q9H306 513 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 ADPRHL2Q9NX46 363 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MRPL15Q9P015 296 aaKnown RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 FBXO2Q9UK22 296 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-221ENST00000556534 SMCHD1A6NHR9 2005 aa4.2□□□□□ -1.74
SCFD1-221ENST00000556534 MED19A0JLT2 244 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-221ENST00000556534 DUXAA6NLW8 204 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 HMGB1P1B2RPK0 211 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-221ENST00000556534 ADAM20O43506 726 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 PRAMEF11O60813 436 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 ZG16O60844 167 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 CSPG5O95196 566 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 BCL10O95999 233 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 NR0B1P51843 470 aaKnown RBP4.19□□□□□ -1.74
SCFD1-221ENST00000556534 CDK3Q00526 305 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 BAATQ14032 418 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-221ENST00000556534 NR1D2Q14995 579 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 IGSF11Q5DX21 431 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 TMEM211Q6ICI0 200 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 FIGLAQ6QHK4 219 aa4.19□□□□□ -1.74
SCFD1-221ENST00000556534 OLFM1Q99784 485 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms