RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZDHHC3Q9NYG2 299 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 AMFRQ9UKV5 643 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 HEBP2Q9Y5Z4 205 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 C17orf113A0A1B0GUU1 675 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 GOLGA6L9A6NEM1 432 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 C21orf140B9A014 251 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 ARHGAP6O43182 974 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 ZBTB11O95625 1053 aaPredicted RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TPH1P17752 444 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 POLR2CP19387 275 aaPredicted RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 CASRP41180 1078 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 CDKN1CP49918 316 aaPredicted RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 KPNA2P52292 529 aaKnown RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TUBB4BP68371 445 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TUBB2AQ13885 445 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 GPR33Q49SQ1 333 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 LACTB2Q53H82 288 aaPredicted RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 ZRANB3Q5FWF4 1079 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TMTC4Q5T4D3 741 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 FAM199XQ6PEV8 388 aaPredicted RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 FBXO38Q6PIJ6 1188 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 PEX26Q7Z412 305 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TMEM135Q86UB9 458 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 KLHDC8BQ8IXV7 354 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 FAM71DQ8N9W8 422 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TTC13Q8NBP0 860 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 DNAJC1Q96KC8 554 aaKnown RBP22.01■■□□□ 1.11
ACTN1-220ENST00000556433 FERD3LQ96RJ6 166 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 TUBB2BQ9BVA1 445 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 EPN3Q9H201 632 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 KCND1Q9NSA2 647 aa22.01■■□□□ 1.11
ACTN1-220ENST00000556433 METTL18O95568 372 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 RECKO95980 971 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 PRKAA1Q13131 559 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 GPR19Q15760 415 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 KCTD11Q693B1 232 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 TAS2R42Q7RTR8 314 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 SERPINA9Q86WD7 417 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 CARFQ8N187 725 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 UBL4BQ8N7F7 174 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 LCN9Q8WX39 176 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 PPM1MQ96MI6 270 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 SOHLH2Q9NX45 425 aa22■■□□□ 1.11
ACTN1-220ENST00000556433 MICALCLQ6ZW33 695 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 TMEM126BQ8IUX1 230 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 ACVR1CQ8NER5 493 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 OR8K5Q8NH50 307 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 ZNF501Q96CX3 271 aaPredicted RBP21.99■■□□□ 1.11
ACTN1-220ENST00000556433 RUFY1Q96T51 708 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 GPR87Q9BY21 358 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 SRMSQ9H3Y6 488 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 ACTL8Q9H568 366 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 COG4Q9H9E3 785 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 NLE1Q9NVX2 485 aaPredicted RBP21.99■■□□□ 1.11
ACTN1-220ENST00000556433 PACSIN2Q9UNF0 486 aaPredicted RBP21.99■■□□□ 1.11
ACTN1-220ENST00000556433 TP53TG5Q9Y2B4 290 aa21.99■■□□□ 1.11
ACTN1-220ENST00000556433 IGLV3-16A0A075B6K0 115 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 SLC9B1P1A6NJY1 282 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 MKRN2OSH3BPM6 223 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 SCRG1O75711 98 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 PRSS56P0CW18 603 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 CDH3P22223 829 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 ACRV1P26436 265 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 RPS15P62841 145 aaKnown RBP21.98■■□□□ 1.11
ACTN1-220ENST00000556433 ZNF449Q6P9G9 518 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 PHC3Q8NDX5 983 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 BAG1Q99933 345 aaPredicted RBP21.98■■□□□ 1.11
ACTN1-220ENST00000556433 LRRC40Q9H9A6 602 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 VPS37BQ9H9H4 285 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 BTRCQ9Y297 605 aa21.98■■□□□ 1.11
ACTN1-220ENST00000556433 TRBV5-4A0A0C4DH59 114 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 GSAPA4D1B5 854 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 MIF4GDA9UHW6 222 aaKnown RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 H7C0S8 307 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 IFRD1O00458 451 aaPredicted RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 DDX3YO15523 660 aaKnown RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 PSMD3O43242 534 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 CPNE3O75131 537 aaKnown RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 PTPN4P29074 926 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 KIF5AQ12840 1032 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 POU6F1Q14863 301 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 SYCE1Q8N0S2 351 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 TAB3Q8N5C8 712 aaPredicted RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 MR1Q95460 341 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 CDKN2AIPNLQ96HQ2 116 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 ALS2CR12Q96Q35 445 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 OR52A5Q9H2C5 316 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 C1GALT1Q9NS00 363 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 POMT2Q9UKY4 750 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 FARSAQ9Y285 508 aaKnown RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 MAN2B2Q9Y2E5 1009 aa21.97■■□□□ 1.11
ACTN1-220ENST00000556433 R3HDM2Q9Y2K5 976 aaKnown RBP21.97■■□□□ 1.11
ACTN1-220ENST00000556433 K7EM74 188 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 MATN2O00339 956 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 RFPL1O75677 317 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 FTCDO95954 541 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 NR1D1P20393 614 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 PDHA2P29803 388 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 PRDX3P30048 256 aaKnown RBP21.96■■□□□ 1.11
ACTN1-220ENST00000556433 CD151P48509 253 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms