RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 ARHGAP22Q7Z5H3 698 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 SPACA3Q8IXA5 215 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CFAP206Q8IYR0 622 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 MCUQ8NE86 351 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CPT1BQ92523 772 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 RSC1A1Q92681 617 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 INSM2Q96T92 566 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 KIFC1Q9BW19 673 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 OR52A5Q9H2C5 316 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 XAB2Q9HCS7 855 aaKnown RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 SOX13Q9UN79 622 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CFAP20Q9Y6A4 193 aaKnown RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 SDK2Q58EX2 2172 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 IGSF10Q6WRI0 2623 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 CTAGE9A4FU28 777 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 B4E171 279 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 LIN7AO14910 233 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TOX3O15405 576 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 POLBP06746 335 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 CCL4P13236 92 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 AMD1P17707 334 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 ITPKBP27987 946 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 NDUFS1P28331 727 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 NMBRP28336 390 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TSPAN7P41732 249 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TTPAP49638 278 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TERF1P54274 439 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TLE3Q04726 772 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 SEMA3AQ14563 771 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 PLCL1Q15111 1095 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 PPP1R7Q15435 360 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 COL28A1Q2UY09 1125 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 TMEM164Q5U3C3 297 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 ZNF449Q6P9G9 518 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 KLHL35Q6PF15 583 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 C19orf48Q6RUI8 117 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 CAND1Q86VP6 1230 aaKnown RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 HNRNPLLQ8WVV9 542 aaKnown RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 ZFPM2Q8WW38 1151 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 SLCO2A1Q92959 643 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 DPH1Q9BZG8 443 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 RAB33BQ9H082 229 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 DDX47Q9H0S4 455 aaKnown RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 KIR3DX1Q9H7L2 352 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 KCND1Q9NSA2 647 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 EPHA6Q9UF33 1036 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 PCYOX1Q9UHG3 505 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 SLC24A2Q9UI40 661 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 ANAPC5Q9UJX4 755 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 PCDHGA3Q9Y5H0 932 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 SAR1BQ9Y6B6 198 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 PRSS21Q9Y6M0 314 aa11.26□□□□□ -0.61
SLIRP-205ENST00000556310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
SLIRP-205ENST00000556310 A8MU76 341 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 C9orf172C9J069 976 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 IFRD1O00458 451 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CD3EAPO15446 510 aaKnown RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CAPN5O15484 640 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 OR1I1O60431 355 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PRAMEF10O60809 474 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 FGF3P11487 239 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 ARNTP27540 789 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CD82P27701 267 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 MAGEA3P43357 314 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PREPP48147 710 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CD151P48509 253 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 RAB15P59190 212 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PTK6Q13882 451 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 SYTL3Q4VX76 610 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 KIAA0930Q6ICG6 404 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PDZD3Q86UT5 571 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 FAM129CQ86XR2 697 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CREG2Q8IUH2 290 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 PPIL6Q8IXY8 311 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 BMPERQ8N8U9 685 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 ELMO1Q92556 727 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 USP7Q93009 1102 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 ART4Q93070 314 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 MFSD3Q96ES6 412 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 ZDHHC12Q96GR4 267 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 NAF1Q96HR8 494 aaKnown RBP11.25□□□□□ -0.61
SLIRP-205ENST00000556310 CAPZA3Q96KX2 299 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 C9orf72Q96LT7 481 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 RUNDC3BQ96NL0 473 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 SERPINB12Q96P63 405 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 TGM7Q96PF1 710 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 TAAR9Q96RI9 348 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 DDA1Q9BW61 102 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms