RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FNBP1LQ5T0N5 605 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 UBXN11Q5T124 520 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 HGSNATQ68CP4 663 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 WASH2PQ6VEQ5 465 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TAC4Q86UU9 113 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 XAGE5Q8WWM1 108 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PCED1BQ96HM7 432 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 MGME1Q9BQP7 344 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 GSDMCQ9BYG8 508 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ALG2Q9H553 416 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 NEUROD4Q9HD90 331 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 FKBP14Q9NWM8 211 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 GDAP2Q9NXN4 497 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CPQQ9Y646 472 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 EDDM13A0A1B0GTR0 161 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TSC22D2O75157 780 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 SHBGP04278 402 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RAP2AP10114 183 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 GSTT1P30711 240 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RPS9P46781 194 aaKnown RBP10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CRADDP78560 199 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 MED22Q15528 200 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 SLC34A3Q8N130 599 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 LRRC57Q8N9N7 239 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 AGAP11Q8TF27 550 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 SMPDL3AQ92484 453 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TSSK3Q96PN8 268 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 B3GAT2Q9NPZ5 323 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 A8MX80 341 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 WRBO00258 174 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 KRT36O76013 467 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 FECHP22830 423 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 IL17AQ16552 155 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 FBXO43Q4G163 708 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TREML2Q5T2D2 321 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RHBDF2Q6PJF5 856 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF567Q8N184 647 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ATAD1Q8NBU5 361 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TMCO6Q96DC7 493 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 KLHL5Q96PQ7 755 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PCDHB18PQ96TA0 734 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PELOQ9BRX2 385 aaKnown RBP10.57□□□□□ -0.72
ACTN1-216ENST00000556083 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ARVCFO00192 962 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TREHO43280 583 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RGS20O76081 388 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 MATN4O95460 622 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PFKLP17858 780 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 BMP6P22004 513 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ARCN1P48444 511 aaKnown RBP10.57□□□□□ -0.72
ACTN1-216ENST00000556083 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TYSND1Q2T9J0 566 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 ECHDC2Q86YB7 292 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 OR5K1Q8NHB7 308 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 SLC13A3Q8WWT9 602 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CMTM7Q96FZ5 175 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 TBATAQ96M53 351 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 GPER1Q99527 375 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 FBRSQ9HAH7 460 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PLEKHA1Q9HB21 404 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PCDHGB6Q9Y5F9 930 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 H0YGN5 161 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TNFRSF10BO14763 440 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 KMOO15229 486 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 LATS1O95835 1130 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 MTHFRP42898 656 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CLCN2P51788 898 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 SRP54P61011 504 aaKnown RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 LIPEQ05469 1076 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 FPGSQ05932 587 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 BNIP1Q12981 228 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM17Q86X19 198 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 PLCZ1Q86YW0 608 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM145Q8NBT3 493 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 ZFP37Q9Y6Q3 630 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 BUD23O43709 281 aaKnown RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 APOC1P02654 83 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 DBTP11182 482 aaKnown RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CPN2P22792 545 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TRIM32Q13049 653 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 RGMAQ96B86 450 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 C1GALT1C1Q96EU7 318 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 FAM84AQ96KN4 292 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 COQ7Q99807 217 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CHID1Q9BWS9 393 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 LRRC3Q9BY71 257 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 RSPH9Q9H1X1 276 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 SUV39H2Q9H5I1 410 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 PDP1Q9P0J1 537 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 NOCTQ9UK39 431 aaKnown RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 GPR25O00155 361 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms