RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CNDP2Q96KP4 475 aaKnown RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 PAFAH2Q99487 392 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 NDNQ99608 321 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 GPR21Q99679 349 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 POPDC3Q9HBV1 291 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 PRDM8Q9NQV8 689 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 POT1Q9NUX5 634 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SIRPGQ9P1W8 387 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC17A6Q9P2U8 582 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 TBC1D29Q9UFV1 150 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC24A2Q9UI40 661 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 ZNF180Q9UJW8 692 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 SLC39A10Q9ULF5 831 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 PADI4Q9UM07 663 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 PCYT1BQ9Y5K3 369 aaPredicted RBP7.48□□□□□ -1.21
TDP1-214ENST00000556063 PSAT1Q9Y617 370 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 COLEC10Q9Y6Z7 277 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 ANKRD12Q6UB98 2062 aa7.48□□□□□ -1.21
TDP1-214ENST00000556063 IQANK1A0A1B0GTG1 560 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 PABPN1LA6NDY0 278 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 RHPN2P1A8MT19 583 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 TRIM38O00635 465 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SLC30A4O14863 429 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 TNFSF14O43557 240 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 NUDT21O43809 227 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 SH3BP5O60239 455 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 GPC4O75487 556 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 PIAS1O75925 651 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SLCO2B1O94956 709 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 C1QAP02745 245 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 ITGA2BP08514 1039 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 NUDT17P0C025 328 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MTHFD1P11586 935 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 CDK4P11802 303 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 GLB1P16278 677 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 STMN1P16949 149 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 CKMT2P17540 419 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 XRCC1P18887 633 aaPredicted RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 CSRP1P21291 193 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 FDXRP22570 491 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 RPL10P27635 214 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 CRABP2P29373 138 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 ABCG1P45844 678 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 PREPP48147 710 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 CLCN7P51798 805 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 IL2P60568 153 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 DNAJC3Q13217 504 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 EFTUD2Q15029 972 aaKnown RBP eCLIP7.47□□□□□ -1.212e-8■■■■■ 57.6
TDP1-214ENST00000556063 TAF1BQ53T94 588 aaPredicted RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 RBM20Q5T481 1227 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 ZNF549Q6P9A3 640 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 FAM83HQ6ZRV2 1179 aaPredicted RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 NEK10Q6ZWH5 1172 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 RAPH1Q70E73 1250 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 PDZD3Q86UT5 571 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SLC22A15Q8IZD6 547 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 NAGSQ8N159 534 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MYO1HQ8N1T3 1032 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SFRP1Q8N474 314 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 ARL14Q8N4G2 192 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 RAB42Q8N4Z0 105 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 NKAPQ8N5F7 415 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 GPR156Q8NFN8 814 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MAGEC3Q8TD91 643 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 SLC37A2Q8TED4 501 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 TFGQ92734 400 aaPredicted RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 FAM136AQ96C01 138 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MTBPQ96DY7 904 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 APOLD1Q96LR9 279 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 C12orf66Q96MD2 445 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 GPR22Q99680 433 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 WWP1Q9H0M0 922 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 OR52A5Q9H2C5 316 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MVB12BQ9H7P6 319 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 IMP3Q9NV31 184 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 PSMC3IPQ9P2W1 217 aaPredicted RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 CPNE7Q9UBL6 633 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 TLK1Q9UKI8 766 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 PSMD13Q9UNM6 376 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 ASF1AQ9Y294 204 aa7.47□□□□□ -1.21
TDP1-214ENST00000556063 MTO1Q9Y2Z2 717 aaKnown RBP7.47□□□□□ -1.21
TDP1-214ENST00000556063 TRBV23OR9-2A0A075B6M9 112 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CPED1A4D0V7 1026 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 A6NCN8 305 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RASGRF2O14827 1237 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 NOBOXO60393 691 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CDH16O75309 829 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TCEA3O75764 348 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CATP04040 527 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 F7P08709 466 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 GIMD1P0DJR0 217 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 MPC1LP0DKB6 136 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CKMT1AP12532 417 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 PNLIPP16233 465 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 MAP4P27816 1152 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 TYK2P29597 1187 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms