RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 NDUFS3O75489 264 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 SLC35G4P0C7Q5 338 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 CLCA4Q14CN2 919 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 UAP1Q16222 522 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 AMZ1Q400G9 498 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 HDXQ7Z353 690 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 ZNF761Q86XN6 746 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 ACSS3Q9H6R3 686 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 PLAC1Q9HBJ0 212 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 ZFATQ9P243 1243 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 ZNF624Q9P2J8 865 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 D6RAR5 112 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 B4GAT1O43505 415 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 SLC19A1P41440 591 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 ARCN1P48444 511 aaKnown RBP20.08■□□□□ 0.81
FOXN3-209ENST00000555353 UBE2IP63279 158 aaKnown RBP20.08■□□□□ 0.81
FOXN3-209ENST00000555353 IFFO1Q0D2I5 559 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 NAB1Q13506 487 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 TRMT10BQ6PF06 316 aaKnown RBP20.08■□□□□ 0.81
FOXN3-209ENST00000555353 UHMK1Q8TAS1 419 aaKnown RBP20.08■□□□□ 0.81
FOXN3-209ENST00000555353 TSSK1BQ9BXA7 367 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 EPB41L4BQ9H329 900 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 POT1Q9NUX5 634 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 NSMCE4AQ9NXX6 385 aa20.08■□□□□ 0.81
FOXN3-209ENST00000555353 PRMT5O14744 637 aaPredicted RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 NUDT17P0C025 328 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 ERVK-10P10266 1014 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 EIF3BP55884 814 aaKnown RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 CASP8Q14790 479 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 ISXQ2M1V0 245 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 RNF187Q5TA31 235 aaPredicted RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 NEPROQ6NW34 567 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 CTAGE3PQ8IX95 158 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 OR10G6Q8NH81 332 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 AHCYL2Q96HN2 611 aaKnown RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 ZMYND15Q9H091 742 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 WWP1Q9H0M0 922 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 COG4Q9H9E3 785 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 PPCSQ9HAB8 311 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 IL1RAPL1Q9NZN1 696 aa20.08■□□□□ 0.8
FOXN3-209ENST00000555353 ATXN7L1Q9ULK2 861 aaPredicted RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 COL27A1Q8IZC6 1860 aaPredicted RBP20.08■□□□□ 0.8
FOXN3-209ENST00000555353 EXOC1LA0A1B0GW35 172 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 UBA6A0AVT1 1052 aaPredicted RBP20.07■□□□□ 0.8
FOXN3-209ENST00000555353 CPNE6O95741 557 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 OGNP20774 298 aaKnown RBP20.07■□□□□ 0.8
FOXN3-209ENST00000555353 GPLD1P80108 840 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 HSP90AA5PQ58FG0 334 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 PIM3Q86V86 326 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 LILRA3Q8N6C8 439 aaPredicted RBP20.07■□□□□ 0.8
FOXN3-209ENST00000555353 GPR150Q8NGU9 434 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 ELMO1Q92556 727 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 GRAMD1AQ96CP6 724 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 TCF12Q99081 682 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 IMP3Q9NV31 184 aaKnown RBP20.07■□□□□ 0.8
FOXN3-209ENST00000555353 TXNDC16Q9P2K2 825 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 PLAAQ9Y263 795 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 IKBKGQ9Y6K9 419 aa20.07■□□□□ 0.8
FOXN3-209ENST00000555353 IGHV1OR21-1A0A087WYE8 117 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 FAM159BA6NKW6 160 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 RPA4Q13156 261 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 RPE65Q16518 533 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 TYSND1Q2T9J0 566 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 KBTBD12Q3ZCT8 623 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 UBAP2Q5T6F2 1119 aaKnown RBP20.06■□□□□ 0.8
FOXN3-209ENST00000555353 ZNF470Q6ECI4 717 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 PTRHD1Q6GMV3 140 aaKnown RBP20.06■□□□□ 0.8
FOXN3-209ENST00000555353 TMEM26Q6ZUK4 368 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 USP53Q70EK8 1073 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 LRRC6Q86X45 466 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 RBM12BQ8IXT5 1001 aaKnown RBP20.06■□□□□ 0.8
FOXN3-209ENST00000555353 UNC5BQ8IZJ1 945 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 C12orf66Q96MD2 445 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 RUFY1Q96T51 708 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 RDH14Q9HBH5 336 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 IARS2Q9NSE4 1012 aaKnown RBP20.06■□□□□ 0.8
FOXN3-209ENST00000555353 GNPTGQ9UJJ9 305 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 VPS9D1Q9Y2B5 631 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 AKAP13Q12802 2813 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 CHD8Q9HCK8 2581 aa20.06■□□□□ 0.8
FOXN3-209ENST00000555353 TPRP12270 2363 aaKnown RBP20.06■□□□□ 0.8
FOXN3-209ENST00000555353 LIN7AO14910 233 aaPredicted RBP20.05■□□□□ 0.8
FOXN3-209ENST00000555353 DUX1O43812 170 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 MTHFD1P11586 935 aaKnown RBP20.05■□□□□ 0.8
FOXN3-209ENST00000555353 CD1CP29017 333 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 MAPK9P45984 424 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 EPHA4P54764 986 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 BOP1Q14137 746 aaKnown RBP20.05■□□□□ 0.8
FOXN3-209ENST00000555353 CLPPQ16740 277 aaPredicted RBP20.05■□□□□ 0.8
FOXN3-209ENST00000555353 SYTL3Q4VX76 610 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 NKAIN2Q5VXU1 208 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 CILP2Q8IUL8 1156 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 PPM1NQ8N819 430 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 SPDYE1Q8NFV5 336 aaPredicted RBP20.05■□□□□ 0.8
FOXN3-209ENST00000555353 TMEM74Q96NL1 305 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 UCK1Q9HA47 277 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 SLC40A1Q9NP59 571 aa20.05■□□□□ 0.8
FOXN3-209ENST00000555353 FETUBQ9UGM5 382 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms