RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SPAG4Q9NPE6 437 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 CNOT6Q9ULM6 557 aaKnown RBP12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 TTC28Q96AY4 2481 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 CACNA1GO43497 2377 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 A0A0J9YVX5 310 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 MATN2O00339 956 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 ADH1CP00326 375 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 PHEXP78562 749 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 RING1Q06587 406 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 LAPTM4AQ15012 233 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 DGKKQ5KSL6 1271 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 C6orf52Q5T4I8 152 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 CCSAPQ6IQ19 270 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 ISCA2Q86U28 154 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 TAGAPQ8N103 731 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 SKA1Q96BD8 255 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 CCT7Q99832 543 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 SQORQ9Y6N5 450 aa12.03□□□□□ -0.48
ARHGEF40-206ENST00000555232 COL6A1P12109 1028 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 HMGA1P17096 107 aaKnown RBP12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 PTGER3P43115 390 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 RAB33AQ14088 237 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 PRAMEF14Q5SWL7 426 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 MFSD6LQ8IWD5 586 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 C2orf15Q8WU43 125 aaKnown RBP12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 LRTOMTQ8WZ04 291 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 IL17FQ96PD4 163 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 ASPSCR1Q9BZE9 553 aa12.02□□□□□ -0.48
ARHGEF40-206ENST00000555232 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 OTCP00480 354 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 TGFB1P01137 390 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 CYP4B1P13584 511 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 ACP5P13686 325 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 CHI3L1P36222 383 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 GJA8P48165 433 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 HERVK_113P63132 956 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 PTCHD3Q3KNS1 767 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 STEAP4Q687X5 459 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 FAM109BQ6ICB4 259 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 SLC2A7Q6PXP3 512 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 DCAF4L2Q8NA75 395 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 OR8D1Q8WZ84 308 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 SORT1Q99523 831 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 ERVK-6Q9BXR3 956 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 SPHK2Q9NRA0 654 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 DOCK6Q96HP0 2047 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 RGS14O43566 566 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 ALOX15P16050 662 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 BPIP17213 487 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 EPORP19235 508 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 IMPDH1P20839 514 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 CRATP43155 626 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.492e-9■■■□□ 17.8
ARHGEF40-206ENST00000555232 ZNF542PQ5EBM4 170 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 REP15Q6BDI9 236 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 DHDDSQ86SQ9 333 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 ZNF554Q86TJ5 538 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 OR10A6Q8NH74 314 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 CLIP3Q96DZ5 547 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 PANX1Q96RD7 426 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 PLAC1Q9HBJ0 212 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 IL26Q9NPH9 171 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 FARSBQ9NSD9 589 aaKnown RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 KCNK6Q9Y257 313 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.49
ARHGEF40-206ENST00000555232 ALDH1A2O94788 518 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 PGLSO95336 258 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 MLYCDO95822 493 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 CLIC3O95833 236 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 ESR1P03372 595 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 ADH5P11766 374 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 COL6A2P12110 1019 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 ARNTP27540 789 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 NFATC2Q13469 925 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 SPIDRQ14159 915 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 SQLEQ14534 574 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 HIST2H2ACQ16777 129 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 PHKG1Q16816 387 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 TECRLQ5HYJ1 363 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 ATAT1Q5SQI0 421 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 CES4AQ5XG92 561 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 HIST2H2AA3Q6FI13 130 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 TTC33Q6PID6 262 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 SPESP1Q6UW49 350 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 VITQ6UXI7 678 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 GALNT10Q86SR1 603 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 MZB1Q8WU39 189 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 ASZ1Q8WWH4 475 aa12.01□□□□□ -0.49
ARHGEF40-206ENST00000555232 MAGEB10Q96LZ2 347 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms