RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 WRAP53Q9BUR4 548 aaKnown RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 AKTIPQ9H8T0 292 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ZDHHC4Q9NPG8 344 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 CACNA2D2Q9NY47 1150 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 PCYT1BQ9Y5K3 369 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 FBP2O00757 339 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 RAD51BO15315 384 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GYG2O15488 501 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 NCF2P19878 526 aaPredicted RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 DPP6P42658 865 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 RGS4P49798 205 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 PKNOX1P55347 436 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 CNTN1Q12860 1018 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GRB7Q14451 532 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 SQLEQ14534 574 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TTC23LQ6PF05 361 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 MBOAT1Q6ZNC8 495 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 DET1Q7L5Y6 550 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 C11orf96Q7Z7L8 435 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 FUNDC1Q8IVP5 155 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 ZNF547Q8IVP9 402 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 RBM12BQ8IXT5 1001 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 BEND7Q8N7W2 519 aaPredicted RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 WDR60Q8WVS4 1066 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 RAB7BQ96AH8 199 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 CMTM5Q96DZ9 223 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 NUS1Q96E22 293 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 PPP1R16AQ96I34 528 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 NTMT1Q9BV86 223 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TRMT61BQ9BVS5 477 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 CD274Q9NZQ7 290 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 SERGEFQ9UGK8 458 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TNPO3Q9Y5L0 923 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 KPNA3O00505 521 aaPredicted RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 CCNT2O60583 730 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 RECQL5O94762 991 aaPredicted RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 C8GP07360 202 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GSTM1P09488 218 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 NFKBIAP25963 317 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GSTM4Q03013 218 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 MTSS1LQ765P7 747 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 SLC22A15Q8IZD6 547 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 OR56A4Q8NGH8 313 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GLMNQ92990 594 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 HGH1Q9BTY7 390 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 BRINP2Q9C0B6 783 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 EYSQ5T1H1 3165 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 DOCK9Q9BZ29 2069 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TBC1D3BA6NDS4 549 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GRXCR2A6NFK2 248 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 ADAM23O75077 832 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 OR4F21O95013 312 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 APODP05090 189 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 VCLP18206 1134 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 PSMD8P48556 350 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 SLC25A3Q00325 362 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 E2F2Q14209 437 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 ACOX1Q15067 660 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TTLL9Q3SXZ7 439 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 DNAL1Q4LDG9 190 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 TCHHL1Q5QJ38 904 aaPredicted RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 CES5AQ6NT32 575 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 ADAMTSL4Q6UY14 1074 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 Q6ZSR9 355 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GPRIN3Q6ZVF9 776 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 ULK2Q8IYT8 1036 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 OR4F6Q8NGB9 312 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 AP2M1Q96CW1 435 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GIMAP2Q9UG22 337 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 STK38LQ9Y2H1 464 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 GPR45Q9Y5Y3 372 aa8.72□□□□□ -1.01
TDP1-210ENST00000554976 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.72□□□□□ -1.01
TDP1-210ENST00000554976 ANKRD12Q6UB98 2062 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 A0A1W2PQF6 199 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 SERTM1A2A2V5 107 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 PRR19A6NJB7 356 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 KPNA5O15131 536 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 TSPAN6O43657 245 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 PRAMEF4O60810 478 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 MMP20O60882 483 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 TEAD1P28347 426 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 ACADVLP49748 655 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 RPS14P62263 151 aaKnown RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 TMEM115Q12893 351 aaPredicted RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 LRP8Q14114 963 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 GGTA1PQ4G0N0 100 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 PRAMEF9Q5VWM5 478 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 KIAA1211LQ6NV74 962 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 YAF2Q8IY57 180 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 AFAP1L2Q8N4X5 818 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 LILRA3Q8N6C8 439 aaPredicted RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 PLA2G15Q8NCC3 412 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 CFAP61Q8NHU2 1237 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms