RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 INHBCP55103 352 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 NFKB2Q00653 900 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 SIM2Q14190 667 aaPredicted RBP17.1■□□□□ 0.33
SHOX-204ENST00000554971 FGL2Q14314 439 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 CDKN3Q16667 212 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 SIRPB2Q5JXA9 342 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 HPS6Q86YV9 775 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 KBTBD2Q8IY47 623 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 SLC25A41Q8N5S1 370 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 WRAP53Q9BUR4 548 aaKnown RBP17.1■□□□□ 0.33
SHOX-204ENST00000554971 MEAF6Q9HAF1 191 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 PREBQ9HCU5 417 aa17.1■□□□□ 0.33
SHOX-204ENST00000554971 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 AIM2O14862 343 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 MAP3K13O43283 966 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PCDH8O95206 1070 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 S1PR4O95977 384 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 IMPDH1P20839 514 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 SUOXP51687 545 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CLCN2P51788 898 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 NAA20P61599 178 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PRAMEP78395 509 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
SHOX-204ENST00000554971 CDC16Q13042 620 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 STX5Q13190 355 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CSHL1Q14406 222 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 LPAL2Q16609 132 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 DPPA4Q7L190 304 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ARMCX6Q7L4S7 300 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PELI3Q8N2H9 469 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CADM4Q8NFZ8 388 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 AGR3Q8TD06 166 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 EID2BQ96D98 161 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 L3HYPDHQ96EM0 354 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 IFT43Q96FT9 208 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 HSPA12BQ96MM6 686 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 BTBD9Q96Q07 612 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 LYSMD1Q96S90 227 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 SUFUQ9UMX1 484 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PSMD13Q9UNM6 376 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 A0A1W2PQU0 124 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 DPPA5A6NC42 116 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 METTL12A8MUP2 240 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 SDHDO14521 159 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 NEMP1O14524 444 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 TSPAN6O43657 245 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 NDUFS2O75306 463 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PDE5AO76074 875 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
SHOX-204ENST00000554971 MAT2AP31153 395 aaKnown RBP17.09■□□□□ 0.33
SHOX-204ENST00000554971 ELP6Q0PNE2 266 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ART3Q13508 389 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ZNF460Q14592 562 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ZNF284Q2VY69 593 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 TMEM52BQ4KMG9 183 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 NXNQ6DKJ4 435 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 MRNIPQ6NTE8 343 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ZC3H14Q6PJT7 736 aaKnown RBP17.09■□□□□ 0.33
SHOX-204ENST00000554971 TRIM69Q86WT6 500 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CBARPQ8N350 705 aaPredicted RBP17.09■□□□□ 0.33
SHOX-204ENST00000554971 PAF1Q8N7H5 531 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 CATSPER1Q8NEC5 780 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 ADGRE3Q9BY15 652 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 SPO11Q9Y5K1 396 aa17.09■□□□□ 0.33
SHOX-204ENST00000554971 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 IGLON5A6NGN9 336 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 A8MT66 165 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 MMP20O60882 483 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 RNGTTO60942 597 aaKnown RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 CCDC166P0CW27 439 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 OGNP20774 298 aaKnown RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 ATP4BP51164 291 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 SQLEQ14534 574 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 KIAA0895LQ68EN5 471 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 ERAP2Q6P179 960 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 NEK5Q6P3R8 708 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 CRTC1Q6UUV9 634 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 LIPIQ6XZB0 460 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 PRR23BQ6ZRT6 265 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 CEP68Q76N32 757 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 SDCCAG8Q86SQ7 713 aaPredicted RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 HORMAD1Q86X24 394 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 SUMF1Q8NBK3 374 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 BRSK1Q8TDC3 778 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 PYDC1Q8WXC3 89 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 ATOH1Q92858 354 aaPredicted RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 KLK6Q92876 244 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 OLFM1Q99784 485 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 SHCBP1LQ9BZQ2 653 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 HCN4Q9Y3Q4 1203 aa17.08■□□□□ 0.33
SHOX-204ENST00000554971 COPG1Q9Y678 874 aaKnown RBP17.08■□□□□ 0.33
SHOX-204ENST00000554971 AURKAO14965 403 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 LDB2O43679 373 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms