RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 FSCN3Q9NQT6 498 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 HAO1Q9UJM8 370 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PTBP2Q9UKA9 531 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 A0A1W2PPV9 198 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 UBA6A0AVT1 1052 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ARHGEF33A8MVX0 844 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TM9SF1O15321 606 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SLC16A5O15375 505 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 OPA1O60313 960 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SHOX2O60902 331 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SNNO75324 88 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 RHOBTB1O94844 696 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ITGB6P18564 788 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PMLP29590 882 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PEBP1P30086 187 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 AFF3P51826 1226 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SP140Q13342 867 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 LRP8Q14114 963 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 KIF19Q2TAC6 998 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PLA2G4EQ3MJ16 856 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 C16orf46Q6P387 395 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PHACTR4Q8IZ21 702 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 RGL4Q8IZJ4 473 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 LSMEM2Q8N112 164 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 NAGSQ8N159 534 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ALKBH8Q96BT7 664 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 L3HYPDHQ96EM0 354 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 LINGO1Q96FE5 620 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TSPAN17Q96FV3 270 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PITPNM3Q9BZ71 974 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 UCKL1Q9NWZ5 548 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PDE10AQ9Y233 779 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 FER1L5A0AVI2 2057 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PRAMEF33A0A0G2JMD5 474 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TLDC2A0PJX2 215 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TMEM120BA0PK00 339 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PATE3B3GLJ2 98 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PROB1E7EW31 1015 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CACNB4O00305 520 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 DLX3O60479 287 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PRAMEF4O60810 478 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 GLRA3O75311 464 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SPAG7O75391 227 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 VPS26AO75436 327 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CSNK1EP49674 416 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 DNAJB13P59910 316 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PPP2R2AP63151 447 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 IFFO1Q0D2I5 559 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PTK2BQ14289 1009 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 N4BP2L1Q5TBK1 243 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PRAMEF9Q5VWM5 478 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CGB2Q6NT52 195 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CRTC3Q6UUV7 619 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ENPP7Q6UWV6 458 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ZYG11AQ6WRX3 759 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF548Q8NEK5 533 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 HMGCLL1Q8TB92 370 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SAP25Q8TEE9 199 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 FAM136AQ96C01 138 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PANX3Q96QZ0 392 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 IL21RQ9HBE5 538 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 GPAMQ9HCL2 828 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 OGFRQ9NZT2 677 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 KLQ9UEF7 1012 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 DCDC2Q9UHG0 476 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF225Q9UK10 706 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 ACOT9Q9Y305 439 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 PIAS2O75928 621 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 AK4P27144 223 aaPredicted RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 ALDH3A1P30838 453 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 GNPDA1P46926 289 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 GRIK2Q13002 908 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 TSNQ15631 228 aaKnown RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 CDKL4Q5MAI5 379 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 DOK6Q6PKX4 331 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 SPDYE1Q8NFV5 336 aaPredicted RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 OR5K2Q8NHB8 316 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 MDM1Q8TC05 714 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 KLHDC7BQ96G42 594 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 SORT1Q99523 831 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 SMG5Q9UPR3 1016 aaKnown RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 RUVBL2Q9Y230 463 aaKnown RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 ASPMQ8IZT6 3477 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 A0A1B0GTL3 188 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 A0A1B0GTQ1 180 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 A0A1B0GVT2 93 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 E2F3O00716 465 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 KPNA5O15131 536 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 ZWINTO95229 277 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 MT-ND3P03897 115 aa6.59□□□□□ -1.35
LINC00517-202ENST00000554257 RPS17P08708 135 aaKnown RBP6.59□□□□□ -1.35
LINC00517-202ENST00000554257 ENO3P13929 434 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms