RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C3orf70A6NLC5 250 aaPredicted RBP8.81□□□□□ -1
SYNE2-209ENST00000553308 E7EQ34 232 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 BTN3A3O00478 584 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 APOL1O14791 398 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 PPP1R12AO14974 1030 aaPredicted RBP8.81□□□□□ -1
SYNE2-209ENST00000553308 ZNF749O43361 778 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 SERPING1P05155 500 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ALPPP05187 535 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 POLBP06746 335 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 MSL3P1P0C860 447 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 MSH3P20585 1137 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 PTPN3P26045 913 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 PRDX3P30048 256 aaKnown RBP8.81□□□□□ -1
SYNE2-209ENST00000553308 CD68P34810 354 aaPredicted RBP8.81□□□□□ -1
SYNE2-209ENST00000553308 GLRBP48167 497 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 WNT3AP56704 352 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ADCY2Q08462 1091 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ITGA9Q13797 1035 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 GSE1Q14687 1217 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 PTPRCAPQ14761 206 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 LONRF2Q1L5Z9 754 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ANO6Q4KMQ2 910 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 TEX44Q53QW1 395 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 FIGNQ5HY92 759 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 SIRPB2Q5JXA9 342 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 DCAF10Q5QP82 559 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ZDHHC20Q5W0Z9 365 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 IGFL3Q6UXB1 125 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 Q6ZS92 163 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 CDHR3Q6ZTQ4 885 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 GLT6D1Q7Z4J2 308 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 DAAM2Q86T65 1068 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 GALNT16Q8N428 558 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 CLEC1AQ8NC01 280 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ST6GALNAC3Q8NDV1 305 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 OR2L2Q8NH16 312 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 DTX3LQ8TDB6 740 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 BLOC1S5Q8TDH9 187 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ZFPM2Q8WW38 1151 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 FER1L6-AS2Q96M78 137 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 DHRS4Q9BTZ2 278 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 PACSIN1Q9BY11 444 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 SRMSQ9H3Y6 488 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 TRABDQ9H4I3 376 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 SYTL2Q9HCH5 934 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 SMOXQ9NWM0 555 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 NENFQ9UMX5 172 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 CSAG2Q9Y5P2 127 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 BZW2Q9Y6E2 419 aaKnown RBP8.81□□□□□ -1
SYNE2-209ENST00000553308 ABCA12Q86UK0 2595 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 CELSR2Q9HCU4 2923 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 ZNF487B1APH4 448 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 MATN2O00339 956 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 BTN3A1O00481 513 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 E2F3O00716 465 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 HNRNPRO43390 633 aaKnown RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 SGTAO43765 313 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 CNOT3O75175 753 aaKnown RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 PRAMEF1O95521 474 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 CBSLP0DN79 551 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 NFKB1P19838 968 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 AGXTP21549 392 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 NDUFS1P28331 727 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 CBSP35520 551 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 FOLR3P41439 243 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 DYNLT1P63172 113 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 KRT33BQ14525 404 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 SSPNQ14714 243 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 SLC9A5Q14940 896 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 NR1I3Q14994 352 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 PRKD1Q15139 912 aaPredicted RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 DEFB110Q30KQ9 67 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 BCL7AQ4VC05 210 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 C1orf189Q5VU69 101 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 MLIPQ5VWP3 458 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 CLEC17AQ6ZS10 378 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 RFX6Q8HWS3 928 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 SLC34A3Q8N130 599 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 ZADH2Q8N4Q0 377 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 ACVR1CQ8NER5 493 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 LCN9Q8WX39 176 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 SYN2Q92777 582 aaPredicted RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 OXNAD1Q96HP4 312 aaPredicted RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 TEKT5Q96M29 485 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 IP6K3Q96PC2 410 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 TRAPPC9Q96Q05 1148 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 DPH2Q9BQC3 489 aaPredicted RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 PITPNM3Q9BZ71 974 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 UNKQ9C0B0 810 aaKnown RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 DEF6Q9H4E7 631 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 P4HTMQ9NXG6 502 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.8□□□□□ -1
SYNE2-209ENST00000553308 HACD3Q9P035 362 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 TMEM63CQ9P1W3 806 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 UVRAGQ9P2Y5 699 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 FAM153AQ9UHL3 310 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 SERTAD3Q9UJW9 196 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 ACSL5Q9ULC5 683 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 OSGIN2Q9Y236 505 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms