RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-207ENST00000553290 DNTTIP2Q5QJE6 756 aaKnown RBP12.63□□□□□ -0.39
ACTN1-207ENST00000553290 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 PACS1Q6VY07 963 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 NLRP9Q7RTR0 991 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 TIPARPQ7Z3E1 657 aaKnown RBP12.63□□□□□ -0.39
ACTN1-207ENST00000553290 BPHLQ86WA6 291 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-207ENST00000553290 PPP1R3BQ86XI6 285 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 RASGRP3Q8IV61 690 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 CARFQ8N187 725 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 CLDN19Q8N6F1 224 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 SIDT2Q8NBJ9 832 aaKnown RBP12.63□□□□□ -0.39
ACTN1-207ENST00000553290 ACVR1CQ8NER5 493 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 EXTL1Q92935 676 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 PEX13Q92968 403 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 SLC45A3Q96JT2 553 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 SLC41A2Q96JW4 573 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 TTC1Q99614 292 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 MAP3K3Q99759 626 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 ULBP3Q9BZM4 244 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 OR52A5Q9H2C5 316 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 MVB12BQ9H7P6 319 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 CASS4Q9NQ75 786 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 BAHCC1Q9P281 2608 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
ACTN1-207ENST00000553290 CFAP46Q8IYW2 2715 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 LOC101059948A0A1B0GTJ6 334 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 CCDC162PA2VCL2 907 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 OR6C74A6NCV1 312 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 ZNF891A8MT65 544 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-207ENST00000553290 F8W8V4 182 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 MATN2O00339 956 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-207ENST00000553290 FGGP02679 453 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 FTH1P02794 183 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 SFTPCP11686 197 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 RPL22P35268 128 aaKnown RBP12.62□□□□□ -0.39
ACTN1-207ENST00000553290 PPARGP37231 505 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-207ENST00000553290 STAT5AP42229 794 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 GRIA1P42261 906 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 ARL4DP49703 201 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 CYP4F2P78329 520 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 ACY1Q03154 408 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 ACVR1Q04771 509 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 PRKAA1Q13131 559 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 TBR1Q16650 682 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 AFTPHQ6ULP2 937 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-207ENST00000553290 CERS6Q6ZMG9 384 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 GSTA5Q7RTV2 222 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 HDAC10Q969S8 669 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 CATSPER2Q96P56 530 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 FERD3LQ96RJ6 166 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 TLR10Q9BXR5 811 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 SEMA4CQ9C0C4 833 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 SRMSQ9H3Y6 488 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 RARRES3Q9UL19 164 aa12.62□□□□□ -0.39
ACTN1-207ENST00000553290 OR51F1A6NGY5 319 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 AP3B1O00203 1094 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 CEP104O60308 925 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 SPAG6O75602 509 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 KIAA0754O94854 1291 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 ZBTB11O95625 1053 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 GOT2P00505 430 aaKnown RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 MT-ND3P03897 115 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 FOLR1P15328 257 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 ZNF28P17035 718 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 POLR2CP19387 275 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 PDHA2P29803 388 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 HSD11B2P80365 405 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 MC1RQ01726 317 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 PLOD1Q02809 727 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 TUBB3Q13509 450 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 PCID2Q5JVF3 399 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 MICALCLQ6ZW33 695 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 GLIS1Q8NBF1 620 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 OR4E2Q8NGC2 313 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 OR4L1Q8NH43 312 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 LCN9Q8WX39 176 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 TFGQ92734 400 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
ACTN1-207ENST00000553290 TFB2MQ9H5Q4 396 aaKnown RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 EIF2B3Q9NR50 452 aaKnown RBP12.61□□□□□ -0.39
ACTN1-207ENST00000553290 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms