RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 HOOK3Q86VS8 718 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 ARL10Q8N8L6 244 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 CTCFLQ8NI51 663 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 DENND1AQ8TEH3 1009 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 PPP4R1Q8TF05 950 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 SMPDL3BQ92485 455 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 PARK7Q99497 189 aaKnown RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 FNDC11Q9BVV2 318 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 DCLK3Q9C098 648 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 MYNNQ9NPC7 610 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 ADPRHL2Q9NX46 363 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 NPAP1Q9NZP6 1156 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 TBC1D7Q9P0N9 293 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 POLLQ9UGP5 575 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 PCDHAC2Q9Y5I4 1007 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 NFS1Q9Y697 457 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 PRSS51A0A1B0GVH4 220 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 LRRD1A4D1F6 860 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 C5orf52A6NGY3 159 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 MEIS2O14770 477 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CAMTA2O94983 1202 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 VIMP08670 466 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 TCF4P15884 667 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 GNAZP19086 355 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PTMSP20962 102 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 S1PR1P21453 382 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PTPN3P26045 913 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 TKTP29401 623 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CORO1AP31146 461 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 COG7P83436 770 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 UBXN1Q04323 297 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 RRS1Q15050 365 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 RABEP1Q15276 862 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CCDC92Q53HC0 331 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 FAM122CQ6P4D5 195 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 GBP6Q6ZN66 633 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PIM3Q86V86 326 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CREBRFQ8IUR6 639 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 NHLRC2Q8NBF2 726 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 OR14A16Q8NHC5 309 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 MGARPQ8TDB4 240 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PIGTQ969N2 578 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 HES6Q96HZ4 224 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF582Q96NG8 517 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CSF3RQ99062 836 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CPNE1Q99829 537 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 SPRTNQ9H040 489 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 RBM38Q9H0Z9 239 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 HIF1ANQ9NWT6 349 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CWC25Q9NXE8 425 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 ERAP1Q9NZ08 941 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 KLHL9Q9P2J3 617 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 CPSF3Q9UKF6 684 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 ABT1Q9ULW3 272 aaKnown RBP4.86□□□□□ -1.63
SCFD1-209ENST00000553280 PADI2Q9Y2J8 665 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 GPRASP1Q5JY77 1395 aa4.86□□□□□ -1.63
SCFD1-209ENST00000553280 LILRA5A6NI73 299 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 FAM86B1E9PN63 330 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 WISP2O76076 250 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 MOCS3O95396 460 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 LDLRP01130 860 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 FAM86B2P0C5J1 330 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 PLA2G4BP0C869 781 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ATP6V1E1P36543 226 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 DSC1Q08554 894 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 COASYQ13057 564 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 PLA2G7Q13093 441 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ITGA7Q13683 1181 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 DHX34Q14147 1143 aaKnown RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 TWIST1Q15672 202 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 C8orf82Q6P1X6 216 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 CCNI2Q6ZMN8 369 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 TMPRSS11FQ6ZWK6 438 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 FAM219AQ8IW50 185 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 KLHL7Q8IXQ5 586 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 SYCP3Q8IZU3 236 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 PGBD5Q8N414 524 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF611Q8N823 705 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 SPC24Q8NBT2 197 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 OR52I2Q8NH67 350 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 DNASE1L2Q92874 299 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ABTB1Q969K4 478 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 SNX21Q969T3 373 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 MTERF3Q96E29 417 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 OTUB1Q96FW1 271 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 FAM84BQ96KN1 310 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 SLX1AQ9BQ83 275 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 BTBD10Q9BSF8 475 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 LMF2Q9BU23 707 aaKnown RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 FN3KQ9H479 309 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 TMEM206Q9H813 350 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 IL1RAPL2Q9NP60 686 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 TCP11L1Q9NUJ3 509 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ABCB8Q9NUT2 735 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 OSER1Q9NX31 292 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 VPS18Q9P253 973 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms