RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 KIAA1191Q96A73 305 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 LGALS12Q96DT0 336 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ZNF599Q96NL3 588 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 AMBRA1Q9C0C7 1298 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 VTA1Q9NP79 307 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 LTBP1Q14766 1721 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 PRMT5O14744 637 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 MED26O95402 600 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 INHBBP09529 407 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 CDKN1CP49918 316 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ARHGEF7Q14155 803 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 RBM23Q86U06 439 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 REXO5Q96IC2 774 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 MCMBPQ9BTE3 642 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 MRM3Q9HC36 420 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 B3GNT3Q9Y2A9 372 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 TCRBV5S2A0A599 114 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 DYTNA2CJ06 578 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 GABRDO14764 452 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 OR1I1O60431 355 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 LCKP06239 509 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 MTHFD2P13995 350 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 AQP1P29972 269 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 S100A3P33764 101 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ACVRL1P37023 503 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 PWP1Q13610 501 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ADPRMQ3LIE5 342 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC39A12Q504Y0 691 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 RFTN2Q52LD8 501 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ATAD3BQ5T9A4 648 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ZCCHC8Q6NZY4 707 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 OR2T11Q8NH01 316 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 OR5K1Q8NHB7 308 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 IMP4Q96G21 291 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 SERPINB11Q96P15 392 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 CINPQ9BW66 212 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 PAK1IP1Q9NWT1 392 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ZIM2Q9NZV7 527 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 PRG3Q9Y2Y8 225 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 SCAMP3O14828 347 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 PKMP14618 531 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 FDXRP22570 491 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 TSTA3Q13630 321 aaPredicted RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 SEMA3AQ14563 771 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 SPANXN2Q5MJ10 180 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 KDELC1Q6UW63 502 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 NECAB2Q7Z6G3 386 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 LIX1Q8N485 282 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 AMER2Q8N7J2 671 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC35B4Q969S0 331 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 ATOH8Q96SQ7 321 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 NTN4Q9HB63 628 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 TRIM39Q9HCM9 518 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 KRT84Q9NSB2 600 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 A8MX80 341 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 PTGESO14684 152 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 UGT2B11O75310 529 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 MC4RP32245 332 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 CDK5R2Q13319 367 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 GPR153Q6NV75 609 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 HIPK1Q86Z02 1210 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 STX19Q8N4C7 294 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 PIK3C3Q8NEB9 887 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 C17orf50Q8WW18 174 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 GPR63Q9BZJ6 419 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 NUAK2Q9H093 628 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 PCDHGC4Q9Y5F7 938 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 ACTL7AQ9Y615 435 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 ZNF831Q5JPB2 1677 aa11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 ZFC3H1O60293 1989 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-227ENST00000552948 CBX4O00257 560 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 ULK1O75385 1050 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 KCNE1P15382 129 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 DCTP40126 519 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 NUDT6P53370 316 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 MFSD10Q14728 455 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 ZFAND4Q86XD8 727 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 KRTCAP2Q8N6L1 136 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 OR4F6Q8NGB9 312 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 ERVK-11Q9UQG0 969 aa11.4□□□□□ -0.59
PPFIA2-227ENST00000552948 COL1A2P08123 1366 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 TRIM64CA6NLI5 447 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 CREG1O75629 220 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 NTRK1P04629 796 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 FGF1P05230 155 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 PFKLP17858 780 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 STC1P52823 247 aa11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 MLLT6P55198 1093 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-227ENST00000552948 CLCA4Q14CN2 919 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms