RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 AMZ1Q400G9 498 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 MAP9Q49MG5 647 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 SPANXN3Q5MJ09 141 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 DUPD1Q68J44 220 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
CDK4-208ENST00000551706 PIM3Q86V86 326 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 AHCYL2Q96HN2 611 aaKnown RBP16.95■□□□□ 0.3
CDK4-208ENST00000551706 CARD6Q9BX69 1037 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 WWP1Q9H0M0 922 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 EPB41L5Q9HCM4 733 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 GNPTGQ9UJJ9 305 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 PSMD13Q9UNM6 376 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 HEBP2Q9Y5Z4 205 aa16.95■□□□□ 0.3
CDK4-208ENST00000551706 GOLGA8KD6RF30 607 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 GOLGA8TH3BQL2 631 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 IFRD1O00458 451 aaPredicted RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 TP73O15350 636 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 DUX1O43812 170 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 MTHFD1P11586 935 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 RPS3P23396 243 aaKnown RBP eCLIP16.94■□□□□ 0.32e-8■■■□□ 17.7
CDK4-208ENST00000551706 CD1CP29017 333 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 CD151P48509 253 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 ADARP55265 1226 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 CAV1Q03135 178 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 CRYMQ14894 314 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 RTP5Q14D33 572 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 ZNF658BQ4V348 819 aaPredicted RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 MSS51Q4VC12 460 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 PTRHD1Q6GMV3 140 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 CAPRIN2Q6IMN6 1127 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 TMEM26Q6ZUK4 368 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 CILP2Q8IUL8 1156 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 ZFPM2Q8WW38 1151 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 ELMO1Q92556 727 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 PANX3Q96QZ0 392 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 TRIM56Q9BRZ2 755 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 STRADBQ9C0K7 418 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 NRSN2Q9GZP1 204 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 P2RY12Q9H244 342 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 DPH5Q9H2P9 285 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 SLC40A1Q9NP59 571 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 C20orf96Q9NUD7 363 aaPredicted RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 INTS10Q9NVR2 710 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 PCDHB1Q9Y5F3 818 aa16.94■□□□□ 0.3
CDK4-208ENST00000551706 ZFC3H1O60293 1989 aaKnown RBP16.94■□□□□ 0.3
CDK4-208ENST00000551706 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
CDK4-208ENST00000551706 H3BMM5 538 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 PYCARD-AS1I3L0S3 204 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 ESR1P03372 595 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 NDUFS1P28331 727 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 CCKBRP32239 447 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 PPM1FP49593 454 aaPredicted RBP16.93■□□□□ 0.3
CDK4-208ENST00000551706 INHBCP55103 352 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 TLE3Q04726 772 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 CBLBQ13191 982 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 SYTL3Q4VX76 610 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 ZNF470Q6ECI4 717 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 XKR5Q6UX68 686 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 ZNF761Q86XN6 746 aaPredicted RBP16.93■□□□□ 0.3
CDK4-208ENST00000551706 LPGAT1Q92604 370 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 FGF11Q92914 225 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 TMEM159Q96B96 161 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 WBP1Q96G27 269 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 C12orf66Q96MD2 445 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 OR52A5Q9H2C5 316 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 IMP3Q9NV31 184 aaKnown RBP16.93■□□□□ 0.3
CDK4-208ENST00000551706 ATXN7L1Q9ULK2 861 aaPredicted RBP16.93■□□□□ 0.3
CDK4-208ENST00000551706 ENTPD2Q9Y5L3 495 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 TEX264Q9Y6I9 313 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 COLEC10Q9Y6Z7 277 aa16.93■□□□□ 0.3
CDK4-208ENST00000551706 PIEZO2Q9H5I5 2752 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 CTAGE15A4D2H0 777 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 B8ZZF3 427 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 E7ESA3 106 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 KPNA5O15131 536 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 BANF1O75531 89 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 CTAGE8P0CG41 777 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 ELK3P41970 407 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 EIF3BP55884 814 aaKnown RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 EIF3IQ13347 325 aaKnown RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 BOP1Q14137 746 aaKnown RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 KRT33BQ14525 404 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 WDR74Q6RFH5 385 aaPredicted RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 USP53Q70EK8 1073 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 CENPUQ71F23 418 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 CTAGE6Q86UF2 777 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 KCNMB4Q86W47 210 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 CTAGE4Q8IX94 777 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 OR4D9Q8NGE8 314 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 ASZ1Q8WWH4 475 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 INSM2Q96T92 566 aaPredicted RBP16.92■□□□□ 0.3
CDK4-208ENST00000551706 RDH14Q9HBH5 336 aa16.92■□□□□ 0.3
CDK4-208ENST00000551706 ZC3H7BQ9UGR2 993 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms