RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 RUFY3Q7L099 469 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 RABEPKQ7Z6M1 372 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 LINC00346Q8IVM7 164 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 ARHGAP12Q8IWW6 846 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 CHERPQ8IWX8 916 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 MAML2Q8IZL2 1156 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 RTL3Q8N8U3 475 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 TMEM116Q8NCL8 245 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 KCNE4Q8WWG9 221 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 MRPS27Q92552 414 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 KLHL29Q96CT2 875 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 METTL2AQ96IZ6 378 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 FERMT1Q9BQL6 677 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 CRACR2AQ9BSW2 395 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 HAUS8Q9BT25 410 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 SLC25A23Q9BV35 468 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 MLPHQ9BV36 600 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 NUF2Q9BZD4 464 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 NYXQ9GZU5 481 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 OSGEPL1Q9H4B0 414 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 CNGB3Q9NQW8 809 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 POLE3Q9NRF9 147 aa4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 PIN4Q9Y237 131 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-208ENST00000551009 ZNF644Q9H582 1327 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 A0A1W2PQM1 296 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 A4D1N5 150 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 ZNF587BE7ETH6 402 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 K7EPI3 171 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 PES1O00541 588 aaKnown RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CASQ2O14958 399 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 SEC14L5O43304 696 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 PSMD10O75832 226 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 SIX3O95343 332 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 AMD1P17707 334 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 EDN2P20800 178 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 ANOS1P23352 680 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CPOXP36551 454 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 METAP2P50579 478 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 LUMP51884 338 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 EFNA5P52803 228 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CAPZA1P52907 286 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 MFAP4P55083 255 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 YBEYP58557 167 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 BRWD1-AS2P59051 145 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 GMFBP60983 142 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 NIPAL4Q0D2K0 466 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 ZBTB17Q13105 803 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TUBB2AQ13885 445 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 FOXL2NBQ6ZUU3 175 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TAOK1Q7L7X3 1001 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 ADCK2Q7Z695 626 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 SFR1Q86XK3 245 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CEP57Q86XR8 500 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 DHX40Q8IX18 779 aaKnown RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 SPATA22Q8NHS9 363 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TMEM255BQ8WV15 326 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 SEPT1Q8WYJ6 367 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CD101Q93033 1021 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 MR1Q95460 341 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 WBP1Q96G27 269 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TMEM19Q96HH6 336 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CSF3RQ99062 836 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TCHPQ9BT92 498 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TUBB2BQ9BVA1 445 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 ABCG8Q9H221 673 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 TTYH1Q9H313 450 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 VPS37BQ9H9H4 285 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 NOX4Q9NPH5 578 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 C1RLQ9NZP8 487 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 CHKBQ9Y259 395 aa4.52□□□□□ -1.69
ATP2B1-208ENST00000551009 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 WDR81Q562E7 1941 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 A0A0G2JPF8 293 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 TEX13CA0A0J9YWL9 993 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 A0A1W2PS18 150 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 HNRNPCL3B7ZW38 293 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 SMPD2O60906 423 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 BCAS2O75934 225 aaPredicted RBP4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 TRIM16O95361 564 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 SP1P08047 785 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 HNRNPCL4P0DMR1 293 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ADSSP30520 456 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 PBX3P40426 434 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 MATR3P43243 847 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 IFNAR2P48551 515 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 NPY4RP50391 375 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 STX1BP61266 288 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ACSM2AQ08AH3 577 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ARL16Q0P5N6 197 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 NPRL3Q12980 569 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 TRADDQ15628 312 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 HYAL4Q2M3T9 481 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ANKRD20A4Q4UJ75 823 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 SLC9B1Q4ZJI4 515 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ANKRD20A8PQ5CZ79 823 aa4.51□□□□□ -1.69
ATP2B1-208ENST00000551009 ANKRD20A2Q5SQ80 823 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms