RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, human

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF41-208	ENST00000550379	EMCN	Q9ULC0	261 aa		7.53	□□□□□ -1.2
RNF41-208	ENST00000550379	SUFU	Q9UMX1	484 aa		7.53	□□□□□ -1.2
RNF41-208	ENST00000550379	HEBP2	Q9Y5Z4	205 aa		7.53	□□□□□ -1.2
RNF41-208	ENST00000550379	MUC6	Q6W4X9	2439 aa		7.53	□□□□□ -1.2
RNF41-208	ENST00000550379	PCDH15	Q96QU1	1955 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KIR2DS5	A0A0G2JLQ3	304 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379		A0A0G2JNG1	304 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	FAM221B	A6H8Z2	402 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	OR2AG2	A6NM03	316 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	MEI4	A8MW99	385 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	LMO7DN	F2Z398	122 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379		H0Y8X5	98 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KIR2DS3	K7RE56	304 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	MYO1C	O00159	1063 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PHGDH	O43175	533 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	FOXD2	O60548	495 aa	Predicted RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	H2AFY	O75367	372 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	IPO13	O94829	963 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	EPN2	O95208	641 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	FKBP9	O95302	570 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TRIM16	O95361	564 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TNF	P01375	233 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	RPN2	P04844	631 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TPBGL	P0DKB5	382 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	SLC2A4	P14672	509 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	XRCC1	P18887	633 aa	Predicted RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	IDS	P22304	550 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	GRK2	P25098	689 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	RPA3	P35244	121 aa	Predicted RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PXN	P49023	591 aa	Predicted RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	WDR4	P57081	412 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	CLDN2	P57739	230 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	ASPH	Q12797	758 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KIR2DS5	Q14953	304 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	ACSBG2	Q5FVE4	666 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PPM1J	Q5JR12	505 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PLA2G2C	Q5R387	149 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TPRG1L	Q5T0D9	272 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TSSK4	Q6SA08	328 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	ZYG11A	Q6WRX3	759 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	RAPH1	Q70E73	1250 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	SPATS2	Q86XZ4	545 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TRAPPC5	Q8IUR0	188 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TRIM42	Q8IWZ5	723 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TBC1D21	Q8IYX1	336 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KRT222	Q8N1A0	295 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	MYO1H	Q8N1T3	1032 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TCAIM	Q8N3R3	496 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PNPLA1	Q8N8W4	532 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	SIDT2	Q8NBJ9	832 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	FAM76A	Q8TAV0	307 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	LKAAEAR1	Q8TD35	194 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	UBTD2	Q8WUN7	234 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	EEF1AKMT1	Q8WVE0	214 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KCTD4	Q8WVF5	259 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	ELMO1	Q92556	727 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	KLK6	Q92876	244 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	NXNL1	Q96CM4	212 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	L3HYPDH	Q96EM0	354 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	SLC6A18	Q96N87	628 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TSNARE1	Q96NA8	513 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	GSDMC	Q9BYG8	508 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	CAB39L	Q9H9S4	337 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PARVB	Q9HBI1	364 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	OXSM	Q9NWU1	459 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TMEM216	Q9P0N5	145 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	SLC23A2	Q9UGH3	650 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	POLG2	Q9UHN1	485 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PTBP2	Q9UKA9	531 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PNMA8B	Q9ULN7	279 aa	Predicted RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TMEM98	Q9Y2Y6	226 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	OARD1	Q9Y530	152 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	PCDHGB2	Q9Y5G2	931 aa		7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	TNPO3	Q9Y5L0	923 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	RIF1	Q5UIP0	2472 aa	Known RBP	7.52	□□□□□ -1.21
RNF41-208	ENST00000550379	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	PRR23A	A6NEV1	266 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	SMIM23	A6NLE4	172 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	IQCF5	A8MTL0	148 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	PROB1	E7EW31	1015 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379		G3V2L1	256 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379		H3BM21	787 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	ZBTB14	O43829	449 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	PCDHGA12	O60330	932 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	KDM1A	O60341	852 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	MTX2	O75431	263 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	BPGM	P07738	259 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	F3	P13726	295 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	CREB1	P16220	341 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	TFEB	P19484	476 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	ITPKA	P23677	461 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	ATP5F1	P24539	256 aa	Predicted RBP	7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	FASLG	P48023	281 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	KCNC1	P48547	511 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	ALDH18A1	P54886	795 aa	Known RBP	7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	RELA	Q04206	551 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	HSPA14	Q0VDF9	509 aa		7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	ILF3	Q12906	894 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
RNF41-208	ENST00000550379	BOP1	Q14137	746 aa	Known RBP	7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms