RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GPRC6AQ5T6X5 926 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 FAM151BQ6UXP7 276 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 ASB18Q6ZVZ8 466 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 GLT6D1Q7Z4J2 308 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 CARFQ8N187 725 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 RASGEF1AQ8N9B8 481 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 TEX19Q8NA77 164 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 SIDT2Q8NBJ9 832 aaKnown RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 GPR150Q8NGU9 434 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 ZFPM2Q8WW38 1151 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 THAP4Q8WY91 577 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 P3H4Q92791 437 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 ZNF514Q96K75 400 aaPredicted RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 CCDC42Q96M95 316 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 FCRL5Q96RD9 977 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 GPR87Q9BY21 358 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 TWSG1Q9GZX9 223 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 NHEJ1Q9H9Q4 299 aaPredicted RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 BPIFA1Q9NP55 256 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 IL17CQ9P0M4 197 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 KLHL8Q9P2G9 620 aaPredicted RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 TRIM10Q9UDY6 481 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 IGHV5-51A0A0C4DH38 117 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 PIPSLA2A3N6 862 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 OR2AG2A6NM03 316 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 K7EM74 188 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 GAPDHSO14556 408 aaPredicted RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 GPR39O43194 453 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CST8O60676 142 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 MFAP3LO75121 409 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CPNE3O75131 537 aaKnown RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 TIAF1O95411 115 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 PYGMP11217 842 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 MTHFD1P11586 935 aaKnown RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 FOLR1P15328 257 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 COMTP21964 271 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 GPC1P35052 558 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 ARL4DP49703 201 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 HADHBP55084 474 aaKnown RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 PPP1CAP62136 330 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 HSD11B2P80365 405 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 SEMA5AQ13591 1074 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 NFE2L1Q14494 772 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 KCNAB1Q14722 419 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 NOMO1Q15155 1222 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CHRNA6Q15825 494 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 UGT8Q16880 541 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 DNTTIP2Q5QJE6 756 aaKnown RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 FHL5Q5TD97 284 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 METRNLQ641Q3 311 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CRYBG3Q68DQ2 2970 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 PWWP2BQ6NUJ5 590 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 SPOCD1Q6ZMY3 1216 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 FAM83HQ6ZRV2 1179 aaPredicted RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 B4GALNT4Q76KP1 1039 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 SYVN1Q86TM6 617 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 OOSP2Q86WS3 158 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 ZNF567Q8N184 647 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 D2HGDHQ8N465 521 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 IPMKQ8NFU5 416 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 OR8K5Q8NH50 307 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 BLOC1S5Q8TDH9 187 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CT55Q8WUE5 264 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 OXNAD1Q96HP4 312 aaPredicted RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 CHP1Q99653 195 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 ACTL8Q9H568 366 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 LATS2Q9NRM7 1088 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 FGF21Q9NSA1 209 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 SPTLC3Q9NUV7 552 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 IMP3Q9NV31 184 aaKnown RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 SAE1Q9UBE0 346 aaPredicted RBP7.44□□□□□ -1.22
NEK3-201ENST00000550331 TLK1Q9UKI8 766 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 TRHDEQ9UKU6 1024 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 ACSL5Q9ULC5 683 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 HIVEP3Q5T1R4 2406 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 CSMD1Q96PZ7 3565 aa7.44□□□□□ -1.22
NEK3-201ENST00000550331 TNRC6AQ8NDV7 1962 aaKnown RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 UBA6A0AVT1 1052 aaPredicted RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 A1L4Q6 167 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 MGAT4DA6NG13 374 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 HACD1B0YJ81 288 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 STX7O15400 261 aaKnown RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A9O60656 530 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 VPS4BO75351 444 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PRAMEF1O95521 474 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 ZBTB11O95625 1053 aaPredicted RBP7.43□□□□□ -1.22
NEK3-201ENST00000550331 SLC35G4P0C7Q5 338 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 EBLN1P0CF75 366 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 TNNT1P13805 278 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A6P19224 532 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 NR1D1P20393 614 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 MSH3P20585 1137 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A1P22309 533 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UGT1A4P22310 534 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 PTPN4P29074 926 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 AKT1P31749 480 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 UQCRFS1P47985 274 aa7.43□□□□□ -1.22
NEK3-201ENST00000550331 RPS15P62841 145 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms