RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ACTR8Q9H981 624 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 IL1RL2Q9HB29 575 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 SLC52A3Q9NQ40 469 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CMTM6Q9NX76 183 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 NFKBIL1Q9UBC1 381 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 MAPRE3Q9UPY8 281 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 AURKCQ9UQB9 309 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TMED5Q9Y3A6 229 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 INSL6Q9Y581 213 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 IGLV3-16A0A075B6K0 115 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 NPIPB15A6NHN6 443 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 ZNF839A8K0R7 811 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 IQCF5A8MTL0 148 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 FXYD1O00168 92 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ZNF197O14709 1029 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 LSM1O15116 133 aaKnown RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 ARPC2O15144 300 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 GUCA1CO95843 209 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SPATA31D3P0C874 917 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 CHRM1P11229 460 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 CSF2RAP15509 400 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ZNF26P17031 533 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 POLR2EP19388 210 aaKnown RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 VIPR1P32241 457 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 CASP2P42575 452 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 HSPA7P48741 367 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 RPIAP49247 311 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 GSK3BP49841 420 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 VASPP50552 380 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 EPHA5P54756 1037 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 NR1H2P55055 460 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 UFM1P61960 85 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 UBE3AQ05086 875 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 TRAF3Q13114 568 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 DYNC1I2Q13409 638 aaKnown RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 CYP51A1Q16850 503 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 FAM98BQ52LJ0 330 aaKnown RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 LRRC66Q68CR7 880 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SLC30A9Q6PML9 568 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 Q6ZSR9 355 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 MSANTD1Q6ZTZ1 278 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SPATA31D4Q6ZUB0 917 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SPPL2CQ8IUH8 684 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ALDH16A1Q8IZ83 802 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 PAPD5Q8NDF8 572 aaKnown RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 GPR26Q8NDV2 337 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 OR52B6Q8NGF0 335 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 OR6K2Q8NGY2 324 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 HM13Q8TCT9 377 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 PROKR1Q8TCW9 393 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 WFIKKN2Q8TEU8 576 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ZFAND2BQ8WV99 257 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 CANT1Q8WVQ1 401 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 LRTOMTQ8WZ04 291 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 EID2BQ96D98 161 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 LMLNQ96KR4 655 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 NSMCE2Q96MF7 247 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SMIM14Q96QK8 99 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ACOX2Q99424 681 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 HEPHQ9BQS7 1158 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 BDH2Q9BUT1 245 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 BBS2Q9BXC9 721 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SLC12A9Q9BXP2 914 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 SLC46A2Q9BY10 475 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 UGT2B28Q9BY64 529 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 DPY30Q9C005 99 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ZDHHC6Q9H6R6 413 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 COQ10BQ9H8M1 238 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 BRD9Q9H8M2 597 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 PARVBQ9HBI1 364 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 LRTM1Q9HBL6 345 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 CD320Q9NPF0 282 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 IL23AQ9NPF7 189 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 PNPLA3Q9NST1 481 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 TDP1Q9NUW8 608 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 C1orf109Q9NX04 203 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ARL15Q9NXU5 204 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ZNF490Q9ULM2 529 aaPredicted RBP8.78□□□□□ -1
TMEM116-209ENST00000550020 PTGDR2Q9Y5Y4 395 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 ST14Q9Y5Y6 855 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 COMMD3-BMI1R4GMX3 469 aa8.78□□□□□ -1
TMEM116-209ENST00000550020 MICAL3Q7RTP6 2002 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 RNF103-CHMP3A0A140T963 221 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 TSPAN11A1L157 253 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 SERTM1A2A2V5 107 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 NEDD8-MDP1E9PL57 170 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 MANBAO00462 879 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 SCAMP3O14828 347 aaKnown RBP8.77□□□□□ -1.01
TMEM116-209ENST00000550020 GSTA4O15217 222 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 TAPBPO15533 448 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 UGDHO60701 494 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 SEC22BO75396 215 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 ZNF821O75541 412 aaPredicted RBP8.77□□□□□ -1.01
TMEM116-209ENST00000550020 RSL1D1O76021 490 aaKnown RBP8.77□□□□□ -1.01
TMEM116-209ENST00000550020 PRAMEF12O95522 483 aa8.77□□□□□ -1.01
TMEM116-209ENST00000550020 LDLRP01130 860 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms