RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 EMCNQ9ULC0 261 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 MYOCOSA0A1B0GUC4 107 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 BHMG1C9JSJ3 638 aaPredicted RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 G3V2L1 256 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 EI24O14681 340 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 SGTAO43765 313 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 GBAP04062 536 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 RPN2P04844 631 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 RPS14P62263 151 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 NFKB2Q00653 900 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 ZNF648Q5T619 568 aaPredicted RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 MMAAQ8IVH4 418 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 DDHD1Q8NEL9 900 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 OR14C36Q8NHC7 312 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 ATAD3AQ9NVI7 634 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 G3V2T6 193 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 PPP6CO00743 305 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 FPGTO14772 594 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 PGFP49763 221 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 FBXW4P57775 412 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 C2orf80Q0P641 193 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 C2orf27AQ580R0 203 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 DPY19L3Q6ZPD9 716 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 ASRGL1Q7L266 308 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 OR4A15Q8NGL6 344 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 PGAP3Q96FM1 320 aaPredicted RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 APOL4Q9BPW4 351 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 TSEN34Q9BSV6 310 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 USE1Q9NZ43 259 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 FNIP2Q9P278 1114 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 MAP4K5Q9Y4K4 846 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 HNRNPCL2B2RXH8 293 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 CNOT3O75175 753 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 EPOP01588 193 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 STATHP02808 62 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 KCNA5P22460 613 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 PREPP48147 710 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 CDH15P55291 814 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 RING1Q06587 406 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 TRIM16LQ309B1 348 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 GDPD4Q6W3E5 623 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 B3GNT6Q6ZMB0 384 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 C10orf53Q8N6V4 93 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 DCAF4L2Q8NA75 395 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 UTP4Q969X6 686 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 MTG2Q9H4K7 406 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 CLK4Q9HAZ1 481 aaKnown RBP14.75□□□□□ -0.05
CUX1-214ENST00000550008 KCNK13Q9HB14 408 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 SELENONQ9NZV5 590 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 RNF11Q9Y3C5 154 aa14.75□□□□□ -0.05
CUX1-214ENST00000550008 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 LAMB2P55268 1798 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 A0A088AWK7 358 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 FAM220BPB1ANY3 271 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 LEFTY2O00292 366 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 NOBOXO60393 691 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 SNNO75324 88 aaPredicted RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 CLIC3O95833 236 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 MYLK3Q32MK0 819 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 PTCHD3Q3KNS1 767 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 TYW3Q6IPR3 259 aaKnown RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 CYP2U1Q7Z449 544 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 C17orf64Q86WR6 236 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 PHYKPLQ8IUZ5 450 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 SFRP1Q8N474 314 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 MYLIPQ8WY64 445 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 SLC28A3Q9HAS3 691 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 OAZ3Q9UMX2 235 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 QSOX1O00391 747 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 EFCAB14O75071 495 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 PAPSS2O95340 614 aaPredicted RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 LMAN2Q12907 356 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 OR4D1Q15615 310 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 UNC50Q53HI1 259 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 CCDC157Q569K6 752 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 CYS1Q717R9 158 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 ARHGAP22Q7Z5H3 698 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 OR52B6Q8NGF0 335 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 MAGEB10Q96LZ2 347 aaPredicted RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 MCMBPQ9BTE3 642 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 ADAMTS4O75173 837 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 CD1DP15813 335 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 GSK3BP49841 420 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 PTGR1Q14914 329 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 C18orf21Q32NC0 220 aaPredicted RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 CYP4Z1Q86W10 505 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 TIFAQ96CG3 184 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 EQTNQ9NQ60 294 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
CUX1-214ENST00000550008 TEKT2Q9UIF3 430 aa14.74□□□□□ -0.05
CUX1-214ENST00000550008 APOA1P02647 267 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 SSR2P43308 183 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 RGRP47804 291 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 MANFP55145 182 aaKnown RBP14.73□□□□□ -0.05
CUX1-214ENST00000550008 NAA20P61599 178 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 CEACAM7Q14002 265 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 GOLGA7Q7Z5G4 137 aa14.73□□□□□ -0.05
CUX1-214ENST00000550008 PXYLP1Q8TE99 480 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms