RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CNSTQ6PJW8 725 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 AFTPHQ6ULP2 937 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 CLEC18BQ6UXF7 455 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 RAPH1Q70E73 1250 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 PTAR1Q7Z6K3 402 aaPredicted RBP19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 SDCCAG8Q86SQ7 713 aaPredicted RBP19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 CLEC18CQ8NCF0 446 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 LPCAT1Q8NF37 534 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 OR4L1Q8NH43 312 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 SREK1Q8WXA9 508 aaKnown RBP19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 ARRDC3Q96B67 414 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 ELMO2Q96JJ3 720 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 MAGEE1Q9HCI5 957 aa19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 FBXO6Q9NRD1 293 aaPredicted RBP19.67■□□□□ 0.74
CTDSP2-204ENST00000548823 RELNP78509 3460 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 SCN8AQ9UQD0 1980 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 CCDC162PA2VCL2 907 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 KLHL2O95198 593 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 PGLSO95336 258 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 IGSF6O95976 241 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 MT-CO1P00395 513 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 NUMBP49757 651 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 TAS2R39P59534 338 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 CDKN3Q16667 212 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 GALNTL6Q49A17 601 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 ARMC12Q5T9G4 340 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 FAM45BPQ6NSW5 357 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 TTC30BQ8N4P2 665 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 OR13C4Q8NGS5 318 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 FAM45AQ8TCE6 357 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 RPL10LQ96L21 214 aaKnown RBP19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 SIKE1Q9BRV8 207 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 CEP44Q9C0F1 390 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 SLC25A18Q9H1K4 315 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 POPDC3Q9HBV1 291 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 PREBQ9HCU5 417 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 CATSPERZQ9NTU4 200 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 RP1P56715 2156 aa19.66■□□□□ 0.74
CTDSP2-204ENST00000548823 USP9YO00507 2555 aaPredicted RBP19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 CCDC187A0A096LP49 1063 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 CPED1A4D0V7 1026 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 EME2A4GXA9 379 aaPredicted RBP19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 NNMTP40261 264 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 HNRNPKP61978 463 aaKnown RBP eCLIP19.65■□□□□ 0.742e-7■■□□□ 13.7
CTDSP2-204ENST00000548823 IRF9Q00978 393 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 AGBL4Q5VU57 503 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 FAM46CQ5VWP2 391 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 GUSBP11Q6P575 273 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 EFL1Q7Z2Z2 1120 aaKnown RBP19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 DSG4Q86SJ6 1040 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 CRLF3Q8IUI8 442 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 PLPP6Q8IY26 295 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 CENPLQ8N0S6 344 aaPredicted RBP19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 OR13H1Q8NG92 308 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 PPP1R14CQ8TAE6 165 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 TUBGCP5Q96RT8 1024 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 CAAP1Q9H8G2 361 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 ABCF3Q9NUQ8 709 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 ZNF358Q9NW07 568 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 MARCH4Q9P2E8 410 aaPredicted RBP19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 VPS9D1Q9Y2B5 631 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 MAN2B2Q9Y2E5 1009 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 PCDHGA7Q9Y5G6 932 aa19.65■□□□□ 0.74
CTDSP2-204ENST00000548823 TARM1B6A8C7 271 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 G3V2L1 256 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 TRAFD1O14545 582 aaPredicted RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC31A1O15431 190 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 PHGDHO43175 533 aaKnown RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 SMAD6O43541 496 aaKnown RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 NOBOXO60393 691 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 WISP3O95389 354 aaPredicted RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 VASPP50552 380 aaPredicted RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 STC1P52823 247 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 SNRPD1P62314 119 aaKnown RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 BCL2L1Q07817 233 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 CNTN1Q12860 1018 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 ATXN7L2Q5T6C5 722 aaPredicted RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 HECTD2Q5U5R9 776 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 ZYG11AQ6WRX3 759 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 CEP97Q8IW35 865 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 TMEM151AQ8N4L1 468 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 GPATCH11Q8N954 259 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 OR2AP1Q8NGE2 309 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 PIH1D2Q8WWB5 315 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 RMDN2Q96LZ7 410 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 GPR78Q96P69 363 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 PSMG3-AS1Q96PY0 264 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 MYOCQ99972 504 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 NPHS2Q9NP85 383 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC25A13Q9UJS0 675 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 ACSL6Q9UKU0 697 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 SARDHQ9UL12 918 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 RUVBL2Q9Y230 463 aaKnown RBP19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 VWA7Q9Y334 891 aa19.64■□□□□ 0.73
CTDSP2-204ENST00000548823 TMEM114B3SHH9 223 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 K7ERQ8 282 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 AURKAO14965 403 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 PFDN6O15212 129 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 ZNF821O75541 412 aaPredicted RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 F7P08709 466 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms