RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PLOD1Q02809 727 aaPredicted RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 TMTC4Q5T4D3 741 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 BORAQ6PGQ7 559 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 C6orf15Q6UXA7 325 aaPredicted RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 CERS6Q6ZMG9 384 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 PPP1R21Q6ZMI0 780 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 LRRC8AQ8IWT6 810 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 SIDT2Q8NBJ9 832 aaKnown RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 ACVR1CQ8NER5 493 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 TRIM58Q8NG06 486 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 GPR150Q8NGU9 434 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 EXTL1Q92935 676 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 SLC41A2Q96JW4 573 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 RANBP9Q96S59 729 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 COG4Q9H9E3 785 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 HOMER3Q9NSC5 361 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 FAM8A1Q9UBU6 413 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 RARRES3Q9UL19 164 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 DRG1Q9Y295 367 aaKnown RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 PCDHB3Q9Y5E6 796 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 CFAP20Q9Y6A4 193 aaKnown RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 ATMQ13315 3056 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 CCL22O00626 93 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
BEST3-209ENST00000548658 ZBTB11O95625 1053 aaPredicted RBP11.1□□□□□ -0.63
BEST3-209ENST00000548658 FTH1P02794 183 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 WT1P19544 449 aaPredicted RBP11.1□□□□□ -0.63
BEST3-209ENST00000548658 STAT5AP42229 794 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SH3BP2P78314 561 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SEMA5AQ13591 1074 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 TBR1Q16650 682 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 LINC00303Q3SY05 128 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 PACS1Q6VY07 963 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 TIPARPQ7Z3E1 657 aaKnown RBP11.1□□□□□ -0.63
BEST3-209ENST00000548658 TAB3Q8N5C8 712 aaPredicted RBP11.1□□□□□ -0.63
BEST3-209ENST00000548658 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 OR52K1Q8NGK4 314 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 OR8K5Q8NH50 307 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 C1orf54Q8WWF1 131 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 LCN9Q8WX39 176 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SGSM3Q96HU1 749 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 FERD3LQ96RJ6 166 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SRMSQ9H3Y6 488 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SYTL2Q9HCH5 934 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 RAB6BQ9NRW1 208 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 SMARCAL1Q9NZC9 954 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 PADI1Q9ULC6 663 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
BEST3-209ENST00000548658 IGHV5-51A0A0C4DH38 117 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 OR6C74A6NCV1 312 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 SNPHO15079 494 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 KDM1AO60341 852 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 SPAG6O75602 509 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 APRTP07741 180 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 OR56A5P0C7T3 313 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TCN2P20062 427 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 CCR10P46092 362 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 CDKN1CP49918 316 aaPredicted RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 TUBB4BP68371 445 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 CYP4F2P78329 520 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 PRAMEP78395 509 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TUBB3Q13509 450 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 SNX1Q13596 522 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TUBB2AQ13885 445 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 DBN1Q16643 649 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 AFTPHQ6ULP2 937 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 GSTA5Q7RTV2 222 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 PIANPQ8IYJ0 282 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 D2HGDHQ8N465 521 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 OR4E2Q8NGC2 313 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 SEC14L1Q92503 715 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TFGQ92734 400 aaPredicted RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 RMDN2Q96LZ7 410 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 MAP3K3Q99759 626 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TUBB2BQ9BVA1 445 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TSSK1BQ9BXA7 367 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 SEMA4CQ9C0C4 833 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 OR52A5Q9H2C5 316 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TFB2MQ9H5Q4 396 aaKnown RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 CASS4Q9NQ75 786 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 EIF2B3Q9NR50 452 aaKnown RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 C1GALT1Q9NS00 363 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 FGF21Q9NSA1 209 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 PIH1D1Q9NWS0 290 aaKnown RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 GEMIN8Q9NWZ8 242 aaKnown RBP11.09□□□□□ -0.63
BEST3-209ENST00000548658 LNPEPQ9UIQ6 1025 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
BEST3-209ENST00000548658 ANAPC5Q9UJX4 755 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms