RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 BTBD2Q9BX70 525 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 SLIRPQ9GZT3 109 aaKnown RBP22.76■■□□□ 1.23
NPAS3-206ENST00000548645 SIAEQ9HAT2 523 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-206ENST00000548645 EIF2B4Q9UI10 523 aaKnown RBP22.76■■□□□ 1.23
NPAS3-206ENST00000548645 MED16Q9Y2X0 877 aa22.76■■□□□ 1.23
NPAS3-206ENST00000548645 MBLAC1A4D2B0 266 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 CCDC81Q6ZN84 652 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 PLD3Q8IV08 490 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 DCBLD1Q8N8Z6 715 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 PSMG2Q969U7 264 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 ESAMQ96AP7 390 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 RHBDF1Q96CC6 855 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 MAGIXQ9H6Y5 334 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 ANKRD28O15084 1053 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 NUAK1O60285 661 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 CD6P30203 668 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 EIF2DP41214 584 aaKnown RBP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 SLC35A2P78381 396 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 DGCR6Q14129 220 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 NR6A1Q15406 480 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 SF3B4Q15427 424 aaKnown RBP eCLIP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 DUSP28Q4G0W2 176 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 IL27RAQ6UWB1 636 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 SVOPQ8N4V2 548 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 C1orf74Q96LT6 269 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 GPR21Q99679 349 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 H0Y626 953 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 E2F3O00716 465 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 UPK1BO75841 260 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 TRIM16O95361 564 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 FMO3P31513 532 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 ARL1P40616 181 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 CATSPEREQ5SY80 951 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 LRRC8DQ7L1W4 858 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 B3GNT8Q7Z7M8 397 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 METTL6Q8TCB7 284 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 SLC13A3Q8WWT9 602 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 LGALS12Q96DT0 336 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 ZBTB18Q99592 522 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 SH3GL1Q99961 368 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 MOV10Q9HCE1 1003 aaKnown RBP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 CD274Q9NZQ7 290 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 RIMKLBQ9ULI2 386 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 TMEM98Q9Y2Y6 226 aa22.75■■□□□ 1.23
NPAS3-206ENST00000548645 POLR3HQ9Y535 204 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-206ENST00000548645 RHOQP17081 205 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 ERVPABLB-1P60509 514 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 CXCR4P61073 352 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 MVKQ03426 396 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 GPSM1Q86YR5 675 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 C3orf58Q8NDZ4 430 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 CDKN2AIPNLQ96HQ2 116 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 ABCB10Q9NRK6 738 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 PRSS56P0CW18 603 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 HOXB6P17509 224 aaKnown RBP22.74■■□□□ 1.23
NPAS3-206ENST00000548645 AKT1P31749 480 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 RCVRNP35243 200 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 TRIP4Q15650 581 aaPredicted RBP22.74■■□□□ 1.23
NPAS3-206ENST00000548645 FAM171BQ6P995 826 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 PGBD5Q8N414 524 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 OR52B6Q8NGF0 335 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 CDK15Q96Q40 435 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 SEMA3CQ99985 751 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 EPS8L2Q9H6S3 715 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 NUDT5Q9UKK9 219 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 HSPE1-MOB4S4R3N1 261 aa22.74■■□□□ 1.23
NPAS3-206ENST00000548645 BRCA1P38398 1863 aaKnown RBP22.73■■□□□ 1.23
NPAS3-206ENST00000548645 NDUFS3O75489 264 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 RETP07949 1114 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 HUNKP57058 714 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 SLC13A2Q13183 592 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 AP5B1Q2VPB7 878 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 C6orf183Q5T699 404 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 PIK3R6Q5UE93 754 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 MCFD2Q8NI22 146 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 NUDT8Q8WV74 236 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 NCLNQ969V3 563 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 RTP3Q9BQQ7 232 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 TBCDQ9BTW9 1192 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 KAT8Q9H7Z6 458 aaKnown RBP22.73■■□□□ 1.23
NPAS3-206ENST00000548645 DCAF13Q9NV06 445 aaKnown RBP22.73■■□□□ 1.23
NPAS3-206ENST00000548645 U3KQV3 271 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 ANKRD36A6QL64 1941 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 SAGE2PA6NJ88 616 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 SNPHO15079 494 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 SNAI1O95863 264 aaPredicted RBP22.73■■□□□ 1.23
NPAS3-206ENST00000548645 IGFBP5P24593 272 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 PHC1P78364 1004 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 VAC14Q08AM6 782 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 PON2Q15165 354 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 LYSMD2Q8IV50 215 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 HTRA1Q92743 480 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 ACBD6Q9BR61 282 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 ZYG11BQ9C0D3 744 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 OSGIN1Q9UJX0 560 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 AP3M1Q9Y2T2 418 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 PCDHB14Q9Y5E9 798 aa22.73■■□□□ 1.23
NPAS3-206ENST00000548645 LSM1O15116 133 aaKnown RBP22.72■■□□□ 1.23
NPAS3-206ENST00000548645 THP07101 528 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms