RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 HS3ST2Q9Y278 367 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 LAMA3Q16787 3333 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 CROCCQ5TZA2 2017 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 FAM149AA5PLN7 773 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 FFAR3O14843 346 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 GPR42O15529 346 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 TFAP2AP05549 437 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PSMA4P25789 261 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 POLE2P56282 527 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 B4GALNT1Q00973 533 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 CREMQ03060 361 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PLA2G4EQ3MJ16 856 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 THEMIS2Q5TEJ8 643 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PPP4R4Q6NUP7 873 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 GOLM1Q8NBJ4 401 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ASIC4Q96FT7 647 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 OSBPL11Q9BXB4 747 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 LATS2Q9NRM7 1088 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 FARSBQ9NSD9 589 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 HCFC1R1Q9NWW0 138 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 OPTCQ9UBM4 332 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PPIL1Q9Y3C6 166 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ANGPTL3Q9Y5C1 460 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PDE4DIPQ5VU43 2346 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 TCRBV5S2A0A599 114 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 SAC3D1A6NKF1 404 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 INPP4BO15327 924 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 CCL16O15467 120 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 TPST1O60507 370 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 IL10P22301 178 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 NSG1P42857 185 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 EEFSECP57772 596 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 TXNL4AP83876 142 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 LRRC73Q5JTD7 316 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 DLEU7Q6UYE1 221 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 TMEM25Q86YD3 366 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 DPP10Q8N608 796 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 KREMEN2Q8NCW0 462 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PRPF18Q99633 342 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PIF1Q9H611 641 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ZDHHC6Q9H6R6 413 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 PAPOLBQ9NRJ5 636 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 DUS2Q9NX74 493 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ZDHHC3Q9NYG2 299 aa18.19■□□□□ 0.5
PRPF40B-208ENST00000548436 ARHGAP10A1A4S6 786 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 OR6B1O95007 311 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CXCL14O95715 111 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CLPTM1O96005 669 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 NPPAP01160 153 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 LINC00271P0C7V0 271 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 DGKQP52824 942 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 PTPN5P54829 565 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CYP51A1Q16850 503 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 DPY19L3Q6ZPD9 716 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 USP45Q70EL2 814 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CARM1Q86X55 608 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 EPHX4Q8IUS5 362 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 UBTD2Q8WUN7 234 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 MUC13Q9H3R2 512 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 RDH14Q9HBH5 336 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 SLCO3A1Q9UIG8 710 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 MBD1Q9UIS9 605 aaPredicted RBP18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC4A7Q9Y6M7 1214 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 K7EPI3 171 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 ENO2P09104 434 aaPredicted RBP18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC2A4P14672 509 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CCR7P32248 378 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 HID1Q8IV36 788 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 METTL25Q8N6Q8 603 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 MCCC1Q96RQ3 725 aaPredicted RBP18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 ASAH2Q9NR71 780 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 KCTD5Q9NXV2 234 aa18.18■□□□□ 0.5
PRPF40B-208ENST00000548436 A0A1B0GTW7 788 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 DYTNA2CJ06 578 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 CARNS1A5YM72 827 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 ARNTLO00327 626 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 UGT2B4P06133 528 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 GPIP06744 558 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 C1SP09871 688 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 MSH3P20585 1137 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 GSTT1P30711 240 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 CLCN2P51788 898 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 RPL38P63173 70 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 SELPLGQ14242 412 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 KIAA0040Q15053 153 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 TTLL9Q3SXZ7 439 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 NHSL2Q5HYW2 709 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 OTOP2Q7RTS6 562 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 ELMOD1Q8N336 334 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 CHCHD4Q8N4Q1 142 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 TRPV3Q8NET8 790 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms