RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 MDM1Q8TC05 714 aa28.19■■■□□ 2.1
BRF1-213ENST00000548421 MGARPQ8TDB4 240 aa28.19■■■□□ 2.1
BRF1-213ENST00000548421 KIAA1191Q96A73 305 aa28.19■■■□□ 2.1
BRF1-213ENST00000548421 PTERQ96BW5 349 aa28.19■■■□□ 2.1
BRF1-213ENST00000548421 MRPL46Q9H2W6 279 aaKnown RBP28.19■■■□□ 2.1
BRF1-213ENST00000548421 ALG9Q9H6U8 611 aa28.19■■■□□ 2.1
BRF1-213ENST00000548421 TRNAU1APQ9NX07 287 aaKnown RBP28.19■■■□□ 2.1
BRF1-213ENST00000548421 CCDC189A1A4V9 331 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 H3BM21 787 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 ETV4P43268 484 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 CSNK1EP49674 416 aaKnown RBP28.18■■■□□ 2.1
BRF1-213ENST00000548421 BLKP51451 505 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 C21orf59P57076 290 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 NXPH1P58417 271 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 LVRNQ6Q4G3 990 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 SPATS2Q86XZ4 545 aaKnown RBP28.18■■■□□ 2.1
BRF1-213ENST00000548421 ARMC2Q8NEN0 867 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 RHEBL1Q8TAI7 183 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 SKA2Q8WVK7 121 aaPredicted RBP28.18■■■□□ 2.1
BRF1-213ENST00000548421 PILRBQ9UKJ0 227 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 IKZF3Q9UKT9 509 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 ACSL5Q9ULC5 683 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 KCNK6Q9Y257 313 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 PLEKHM1Q9Y4G2 1056 aa28.18■■■□□ 2.1
BRF1-213ENST00000548421 NPEPPSL1A6NEC2 478 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 TK2O00142 265 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 SCAMP1O15126 338 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 CHN1P15882 459 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 PDHA2P29803 388 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 IRX4P78413 519 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 TSNQ15631 228 aaKnown RBP28.17■■■□□ 2.1
BRF1-213ENST00000548421 CCDC63Q8NA47 563 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 STAG3L4Q8TBR4 150 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 OSGEPL1Q9H4B0 414 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 OGFRQ9NZT2 677 aa28.17■■■□□ 2.1
BRF1-213ENST00000548421 PRR19A6NJB7 356 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 CDC7O00311 574 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 OR4D1Q15615 310 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 ADAMTSL2Q86TH1 951 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 PHACTR4Q8IZ21 702 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 TMEM168Q9H0V1 697 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 OR52A5Q9H2C5 316 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 MLXIPLQ9NP71 852 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 DNAJC28Q9NX36 388 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 CPSF2Q9P2I0 782 aaKnown RBP28.16■■■□□ 2.1
BRF1-213ENST00000548421 KLF15Q9UIH9 416 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 MID2Q9UJV3 735 aa28.16■■■□□ 2.1
BRF1-213ENST00000548421 KERAO60938 352 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 DPP6P42658 865 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 MAPK9P45984 424 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 CTBSQ01459 385 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 HHATQ5VTY9 493 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 PRR23BQ6ZRT6 265 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 SYT12Q8IV01 421 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 TMEM151AQ8N4L1 468 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 RDH11Q8TC12 318 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 TMEM74BQ9NUR3 256 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 INTS9Q9NV88 658 aaKnown RBP28.15■■■□□ 2.1
BRF1-213ENST00000548421 RNF112Q9ULX5 631 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 ANKRD12Q6UB98 2062 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 C8GP07360 202 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 DHRS4L1P0CG22 281 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 CLCNKAP51800 687 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 WDR4P57081 412 aaKnown RBP28.15■■■□□ 2.1
BRF1-213ENST00000548421 ZNF542PQ5EBM4 170 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 PEAR1Q5VY43 1037 aaPredicted RBP28.15■■■□□ 2.1
BRF1-213ENST00000548421 PAIP2Q9BPZ3 127 aaKnown RBP28.15■■■□□ 2.1
BRF1-213ENST00000548421 ST14Q9Y5Y6 855 aa28.15■■■□□ 2.1
BRF1-213ENST00000548421 TDRD6O60522 2096 aaKnown RBP28.14■■■□□ 2.1
BRF1-213ENST00000548421 KNL1Q8NG31 2342 aa28.14■■■□□ 2.1
BRF1-213ENST00000548421 TARM1B6A8C7 271 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 MATN4O95460 622 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 CSF2P04141 144 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 SBK3P0C264 359 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 NME1P15531 152 aaKnown RBP28.14■■■□□ 2.09
BRF1-213ENST00000548421 JUNDP17535 347 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 IDSP22304 550 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 HOXD12P35452 270 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 ILF3Q12906 894 aaKnown RBP eCLIP28.14■■■□□ 2.09
BRF1-213ENST00000548421 SP140Q13342 867 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 SBSNQ6UWP8 590 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 PDZD3Q86UT5 571 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 ASB11Q8WXH4 323 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 PIGKQ92643 395 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 FOPNLQ96NB1 174 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 ATOH8Q96SQ7 321 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 TCEAL2Q9H3H9 227 aaPredicted RBP28.14■■■□□ 2.09
BRF1-213ENST00000548421 APOBEC3BQ9UH17 382 aaKnown RBP28.14■■■□□ 2.09
BRF1-213ENST00000548421 ADAMTS6Q9UKP5 1117 aa28.14■■■□□ 2.09
BRF1-213ENST00000548421 CACNA1EQ15878 2313 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 PI4KAP42356 2102 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 SYCE1LA8MT33 242 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 SLC16A5O15375 505 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 SLC35G4P0C7Q5 338 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 ABRQ12979 859 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 FRA10AC1Q70Z53 315 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 COPG2Q9UBF2 871 aa28.13■■■□□ 2.09
BRF1-213ENST00000548421 A0A1B0GVT2 93 aa28.12■■■□□ 2.09
BRF1-213ENST00000548421 POLR3GO15318 223 aaPredicted RBP28.12■■■□□ 2.09
BRF1-213ENST00000548421 CTSEP14091 401 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms