RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PRKAA1Q13131 559 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ATP1A4Q13733 1029 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ITGA9Q13797 1035 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 TRIM14Q14142 442 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 LONRF2Q1L5Z9 754 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 IZUMO3Q5VZ72 239 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 MICALCLQ6ZW33 695 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 VSTM4Q8IW00 320 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 DDHD1Q8NEL9 900 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 OR1L3Q8NH93 324 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ADAMTS17Q8TE56 1095 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 TFB1MQ8WVM0 346 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 OXNAD1Q96HP4 312 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 MRGPRX2Q96LB1 330 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 CD180Q99467 661 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 CHP1Q99653 195 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 APOL2Q9BQE5 337 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 NLNQ9BYT8 704 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ASB8Q9H765 288 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ACTR5Q9H9F9 607 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 FANCEQ9HB96 536 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 GPR83Q9NYM4 423 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 CREBBPQ92793 2442 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 CST8O60676 142 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 CLDN1O95832 211 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 TPM1P09493 284 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SLC35G4P0C7Q5 338 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ST6GAL1P15907 406 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 OLIG2Q13516 323 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SLC1A5Q15758 541 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 MLIPQ5VWP3 458 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 PAPD7Q5XG87 772 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNF517Q6ZMY9 492 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SYTL1Q8IYJ3 562 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNF567Q8N184 647 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 OR8K5Q8NH50 307 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 LCN9Q8WX39 176 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SNRNP40Q96DI7 357 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SGSM3Q96HU1 749 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 RMDN2Q96LZ7 410 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 CCDC42Q96M95 316 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SLC29A3Q9BZD2 475 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SRMSQ9H3Y6 488 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 TSPY26PQ9H489 355 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 TRABDQ9H4I3 376 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 XKR8Q9H6D3 395 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 KIR3DX1Q9H7L2 352 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 SPTLC3Q9NUV7 552 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ASF1BQ9NVP2 202 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 CUEDC1Q9NWM3 386 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 FKBPLQ9UIM3 349 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ERRFI1Q9UJM3 462 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 ACSL5Q9ULC5 683 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 COLEC10Q9Y6Z7 277 aa11.62□□□□□ -0.55
TRAFD1-205ENST00000548277 CROCCQ5TZA2 2017 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 CCDC66A2RUB6 948 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 BTN3A3O00478 584 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNF749O43361 778 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 CEACAM4O75871 244 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 PRAMEF1O95521 474 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 CAPN1P07384 714 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 RAB40ALP0C0E4 278 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 PRDX3P30048 256 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 RORAP35398 523 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 FOXL2P58012 376 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 ADCY2Q08462 1091 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 PRKG2Q13237 762 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 PRKD1Q15139 912 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 SLC14A2Q15849 920 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 C1orf189Q5VU69 101 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 ZDHHC20Q5W0Z9 365 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 MED25Q71SY5 747 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 TMEM102Q8N9M5 508 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 OR4K2Q8NGD2 314 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 OR2L2Q8NH16 312 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 PNPLA2Q96AD5 504 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 DCUN1D1Q96GG9 259 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 RBM41Q96IZ5 413 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 FICDQ9BVA6 458 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 FSD1LQ9BXM9 530 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 C1GALT1Q9NS00 363 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 ABHD10Q9NUJ1 306 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 HACD3Q9P035 362 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 RSPH14Q9UHP6 348 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 SERTAD3Q9UJW9 196 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 BTRCQ9Y297 605 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 NUP210LQ5VU65 1888 aa11.61□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNF487B1APH4 448 aa11.6□□□□□ -0.55
TRAFD1-205ENST00000548277 BTN3A1O00481 513 aa11.6□□□□□ -0.55
TRAFD1-205ENST00000548277 CCL22O00626 93 aa11.6□□□□□ -0.55
TRAFD1-205ENST00000548277 SPOPO43791 374 aa11.6□□□□□ -0.55
TRAFD1-205ENST00000548277 MFAP3LO75121 409 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms