RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 ZNF501Q96CX3 271 aaPredicted RBP12.12□□□□□ -0.47
GCN1-204ENST00000548132 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 CD180Q99467 661 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 COPS8Q99627 209 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 SLC25A18Q9H1K4 315 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 ZDHHC3Q9NYG2 299 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
GCN1-204ENST00000548132 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 TUBD1Q9UJT1 453 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 SEC16AO15027 2179 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 K7EM74 188 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 BTN3A3O00478 584 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 BTN3A1O00481 513 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 LIASO43766 372 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 TPBGLP0DKB5 382 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 DLSTP36957 453 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 GPS2Q13227 327 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 DNASE1L3Q13609 305 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 IL10RAQ13651 578 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 BOP1Q14137 746 aaKnown RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 SEPT6Q14141 434 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 SEMA3AQ14563 771 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 PRAMEF17Q5VTA0 474 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 C6orf15Q6UXA7 325 aaPredicted RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 PACS1Q6VY07 963 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 ZNF534Q76KX8 674 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 SLC38A9Q8NBW4 561 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 LKAAEAR1Q8TD35 194 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 ZNF778Q96MU6 729 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 PPP1R2P1Q96PQ5 205 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 EPN3Q9H201 632 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 TRIT1Q9H3H1 467 aaKnown RBP12.11□□□□□ -0.47
GCN1-204ENST00000548132 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 ICKQ9UPZ9 632 aa12.11□□□□□ -0.47
GCN1-204ENST00000548132 CCDC162PA2VCL2 907 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 KLHL33A6NCF5 533 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 SUN1O94901 812 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 POLBP06746 335 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 ETS1P14921 441 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 ST6GAL1P15907 406 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 NR1D1P20393 614 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 HADHAP40939 763 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
GCN1-204ENST00000548132 PDE1BQ01064 536 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 ACVR1Q04771 509 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 DEFB109BQ30KR1 87 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 P3H1Q32P28 736 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 GPR33Q49SQ1 333 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 LCN10Q6JVE6 187 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 FAM198BQ6UWH4 519 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 KMT5CQ86Y97 462 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 RASGRP3Q8IV61 690 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 SYCE1Q8N0S2 351 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 UBL4BQ8N7F7 174 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
GCN1-204ENST00000548132 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 OR52K1Q8NGK4 314 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 STAMBPL1Q96FJ0 436 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 CDKN2AIPNLQ96HQ2 116 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 CATSPER2Q96P56 530 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 HGH1Q9BTY7 390 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 LHX9Q9NQ69 397 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 FGF21Q9NSA1 209 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
GCN1-204ENST00000548132 C17orf113A0A1B0GUU1 675 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 H3BMH7 237 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 HCRTR1O43613 425 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
GCN1-204ENST00000548132 WISP1O95388 367 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 PDGFAP04085 211 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 PVRP15151 417 aa12.09□□□□□ -0.47
GCN1-204ENST00000548132 POLR2CP19387 275 aaPredicted RBP12.09□□□□□ -0.47
GCN1-204ENST00000548132 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
GCN1-204ENST00000548132 PEBP1P30086 187 aaKnown RBP12.09□□□□□ -0.47
GCN1-204ENST00000548132 RORAP35398 523 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms