RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NFE2L1Q14494 772 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 DUOXA1Q1HG43 343 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 LVRNQ6Q4G3 990 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 SDR16C5Q8N3Y7 309 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 FSTL5Q8N475 847 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 CCDC63Q8NA47 563 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 SREK1Q8WXA9 508 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 GPR78Q96P69 363 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 TRIM54Q9BYV2 358 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 IRF2BPLQ9H1B7 796 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 OSGEPL1Q9H4B0 414 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 TMEM216Q9P0N5 145 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 GULP1Q9UBP9 304 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC23A2Q9UGH3 650 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 APOBEC3BQ9UH17 382 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 TMCO1Q9UM00 188 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 LRP4O75096 1905 aa15.51■□□□□ 0.07
TRAFD1-203ENST00000547063 ZBTB14O43829 449 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 DFNA5O60443 496 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PLIN3O60664 434 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 KERAO60938 352 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 MATN4O95460 622 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 CATP04040 527 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 HALP42357 657 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PREPP48147 710 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 GLRBP48167 497 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 CTBSQ01459 385 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 ELOCQ15369 112 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 TECRLQ5HYJ1 363 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 HHATQ5VTY9 493 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 UNC5DQ6UXZ4 953 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 WASH2PQ6VEQ5 465 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 NAPRTQ6XQN6 538 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 CYHR1Q6ZMK1 362 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 CDHR3Q6ZTQ4 885 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 FRA10AC1Q70Z53 315 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PIWIL4Q7Z3Z4 852 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 ISCA2Q86U28 154 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 SPATS2Q86XZ4 545 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 SPATA6LQ8N4H0 392 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 ANKRD42Q8N9B4 389 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 GPBAR1Q8TDU6 330 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 CCDC126Q96EE4 140 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 FAM111AQ96PZ2 611 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 OR52A5Q9H2C5 316 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 WASH6PQ9NQA3 447 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 TM7SF3Q9NS93 570 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 SPASTQ9UBP0 616 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 RNF112Q9ULX5 631 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 KCNK6Q9Y257 313 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PCDHGA5Q9Y5G8 931 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 PCYT1BQ9Y5K3 369 aaPredicted RBP15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 FANCMQ8IYD8 2048 aa15.5■□□□□ 0.07
TRAFD1-203ENST00000547063 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ZNF318Q5VUA4 2279 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 A0A1B0GVT2 93 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 PRR19A6NJB7 356 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 PROCP04070 461 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 HIST1H2AGP0C0S8 130 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC2A4P14672 509 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 HIST1H2ADP20671 130 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 CYP2A7P20853 494 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 MAP4P27816 1152 aaKnown RBP15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ACTR1BP42025 376 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ACTR1AP61163 376 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ASPHQ12797 758 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 CDKL4Q5MAI5 379 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 TTC23LQ6PF05 361 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 IL27RAQ6UWB1 636 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 FAM83HQ6ZRV2 1179 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 VRK3Q8IV63 474 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 MAGEC3Q8TD91 643 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 MCOLN3Q8TDD5 553 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 DENND1AQ8TEH3 1009 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ASB11Q8WXH4 323 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 HIST1H2AHQ96KK5 128 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 HIST1H2AJQ99878 128 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 H2AFJQ9BTM1 129 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ZDHHC5Q9C0B5 715 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 TMEM168Q9H0V1 697 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ALG9Q9H6U8 611 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ZNF358Q9NW07 568 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC17A7Q9P2U7 560 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 XPR1Q9UBH6 696 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 PCOLCE2Q9UKZ9 415 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 HEBP2Q9Y5Z4 205 aa15.49■□□□□ 0.07
TRAFD1-203ENST00000547063 ZFC3H1O60293 1989 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 NPEPPSL1A6NEC2 478 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 PDZK1P1A8MUH7 402 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 GFYI3L273 518 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 YKT6O15498 198 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 SMIM24O75264 130 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 PSIP1O75475 530 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 TOP3BO95985 862 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 S100BP04271 92 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 TPBGLP0DKB5 382 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 MYL2P10916 166 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 CPA3P15088 417 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms