RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MTERF1Q99551 399 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 HIST1H2AJQ99878 128 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 H2AFJQ9BTM1 129 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 ULK1O75385 1050 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 EFEMP2O95967 443 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SLC26A3P40879 764 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 POLR2JP52435 117 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 FPGSQ05932 587 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 CRTC3Q6UUV7 619 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 GDPD4Q6W3E5 623 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 GET4Q7L5D6 327 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 OR2A12Q8NGT7 310 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 KLK6Q92876 244 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 PEX13Q92968 403 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 LRRC3Q9BY71 257 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 COQ10BQ9H8M1 238 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 TAPBPO15533 448 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 EPB42P16452 691 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 HOXB8P17481 243 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 IL12AP29459 219 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 BMPR1AP36894 532 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 C12orf40Q86WS4 652 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 FAM83DQ9H4H8 585 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SPATS2LQ9NUQ6 558 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 DUS2Q9NX74 493 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 CORO1CQ9ULV4 474 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 CFAP20Q9Y6A4 193 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 DOCK9Q9BZ29 2069 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 OR7A17O14581 309 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 LILRB3O75022 631 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 RSL1D1O76021 490 aaKnown RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SUOXP51687 545 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SLC7A9P82251 487 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 FAM174BQ3ZCQ3 159 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 GTDC1Q4AE62 458 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SYTL3Q4VX76 610 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 FNDC3BQ53EP0 1204 aaKnown RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 AAGABQ6PD74 315 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 CHSY3Q70JA7 882 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SPPL3Q8TCT6 385 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 SELENOMQ8WWX9 145 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 FIG4Q92562 907 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 NCLNQ969V3 563 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 NRTNQ99748 197 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 P2RY12Q9H244 342 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 MOSPD1Q9UJG1 213 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 STK16O75716 305 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 GBAP04062 536 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 MSH3P20585 1137 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 OXTRP30559 389 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 B4GALNT1Q00973 533 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 TLR1Q15399 786 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 CCSMST1Q4G0I0 132 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 CERS6Q6ZMG9 384 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 PNPT1Q8TCS8 783 aaKnown RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 KCTD14Q9BQ13 255 aaPredicted RBP12.48□□□□□ -0.41
SCAF11-209ENST00000547018 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 CMTM6Q9NX76 183 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 VPS4AQ9UN37 437 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 AP4B1Q9Y6B7 739 aa12.48□□□□□ -0.41
SCAF11-209ENST00000547018 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 C1SP09871 688 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 IDO1P14902 403 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 CTSCP53634 463 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 LIPEQ05469 1076 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 STARD3Q14849 445 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PDK3Q15120 406 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 TTLL9Q3SXZ7 439 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ANKRD26P1Q6NSI1 321 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ADGRD2Q7Z7M1 963 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PDSS2Q86YH6 399 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 FBXO30Q8TB52 745 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 EGLN2Q96KS0 407 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 RNF145Q96MT1 663 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PRPF18Q99633 342 aaKnown RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 RAD9AQ99638 391 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SLC29A1Q99808 456 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ELOVL6Q9H5J4 265 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SARDHQ9UL12 918 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms