RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PREPP48147 710 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 GABRA4P48169 554 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 XRCC4Q13426 336 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 HADHQ16836 314 aaKnown RBP14.28□□□□□ -0.12
RTN3-214ENST00000545432 B3GNTL1Q67FW5 361 aaPredicted RBP14.28□□□□□ -0.12
RTN3-214ENST00000545432 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 PPP1R32Q7Z5V6 425 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 OR2Y1Q8NGV0 311 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 OR2L2Q8NH16 312 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 GRHL3Q8TE85 626 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 PTERQ96BW5 349 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 GBP5Q96PP8 586 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 TRAPPC9Q96Q05 1148 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 WWP1Q9H0M0 922 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 CBX8Q9HC52 389 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 BPIFA1Q9NP55 256 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 ATP13A2Q9NQ11 1180 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 NOVA2Q9UNW9 492 aaKnown RBP14.28□□□□□ -0.12
RTN3-214ENST00000545432 CSAG2Q9Y5P2 127 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 CFAP20Q9Y6A4 193 aaKnown RBP14.28□□□□□ -0.12
RTN3-214ENST00000545432 FER1L5A0AVI2 2057 aa14.27□□□□□ -0.12
RTN3-214ENST00000545432 ANKRD12Q6UB98 2062 aa14.27□□□□□ -0.12
RTN3-214ENST00000545432 ITPR3Q14573 2671 aa14.27□□□□□ -0.12
RTN3-214ENST00000545432 PRSS44E7EML9 344 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 E7EQ34 232 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 PEX12O00623 359 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A9O60656 530 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 CNOT3O75175 753 aaKnown RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 EPOP01588 193 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 PYGMP11217 842 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A6P19224 532 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 POLR2CP19387 275 aaPredicted RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 CDH3P22223 829 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A1P22309 533 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A4P22310 534 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 MYL5Q02045 173 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 TESK1Q15569 626 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 ASIC2Q16515 512 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 KYNUQ16719 465 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 ZXDCQ2QGD7 858 aaPredicted RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 ZFYVE27Q5T4F4 411 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 GPRC6AQ5T6X5 926 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 HGSNATQ68CP4 663 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 ZNF324BQ6AW86 544 aaPredicted RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 RHBDD2Q6NTF9 364 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 RPUSD3Q6P087 351 aaKnown RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 PLD5Q8N7P1 536 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
RTN3-214ENST00000545432 OR4E2Q8NGC2 313 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 LURAP1Q96LR2 239 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 C12orf66Q96MD2 445 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 THAP2Q9H0W7 228 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 ANAPC7Q9UJX3 599 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 COLEC10Q9Y6Z7 277 aa14.27□□□□□ -0.13
RTN3-214ENST00000545432 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 MYO1FO00160 1098 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 LDB2O43679 373 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 SGTAO43765 313 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 ONECUT2O95948 504 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 UMODP07911 640 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 CBSLP0DN79 551 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 HLA-DPA1P20036 260 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 CBSP35520 551 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 SPAM1P38567 509 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 ARCN1P48444 511 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 KLHL30Q0D2K2 578 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 PRKAA1Q13131 559 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 AIMP2Q13155 320 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 BCL7AQ4VC05 210 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 FCRL6Q6DN72 434 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 DUS1LQ6P1R4 473 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 CDHR3Q6ZTQ4 885 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 B4GALNT4Q76KP1 1039 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 ACVR1CQ8NER5 493 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 GDAP1Q8TB36 358 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 RMDN2Q96LZ7 410 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 TFB2MQ9H5Q4 396 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
RTN3-214ENST00000545432 COPG2Q9UBF2 871 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 AP1M2Q9Y6Q5 423 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 MED13LQ71F56 2210 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
RTN3-214ENST00000545432 OR2AG2A6NM03 316 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 AGPSO00116 658 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 MASP2O00187 686 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 BTN3A3O00478 584 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 DDX3YO15523 660 aaKnown RBP14.25□□□□□ -0.13
RTN3-214ENST00000545432 MT-CYBP00156 380 aaPredicted RBP14.25□□□□□ -0.13
RTN3-214ENST00000545432 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
RTN3-214ENST00000545432 FOLR3P41439 243 aa14.25□□□□□ -0.13
RTN3-214ENST00000545432 LONRF2Q1L5Z9 754 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms